FMO07874.5prime Sequence
566 bp (566 high quality bases) assembled on 2009-08-11
> FMO07874.5prime
CAGTCGACATGAACCTGGGAAGGCTGCTGAATCCACTGAGGAGCACCGCA
TGTTCGGTGCGCAGCTACGGAAAGCACAACAAGAAGTTCCTCTACAAAAA
TGGCCAGAAATTTGAGGGTATCACCTACTATCCCAGGACTCCCGATCACC
AGGATCCACCCGTGGAGCCGGCGAAACTTTTCCGGGTGCAGCGCATCAAG
CCGCTAAAGGGCAATCCCTACTGGGAGAATCGAATCCTCAAAGATCTGGG
ACTAGACGGAAAGCAGAGCGATTTTACTGTCGTCAAGAACATACCGGAGA
ACAATGCCCGCCTGTGGAAGATCAAGCATCTAATTAAGGTTACGCCGGTC
ACGTTCCCCTACGGAGAGCCCACTGCCCAGGATGTCCGGCATACGATACT
CAAGGAGAACGGCGAGTGCCTGGTAACCAAGGACCTGGGACCCATCGATA
CCCGCCTGGCGGCTCGCCAGGATTACGACGAGCAGCCCAAGCGACTGGAT
ACCGATCTGCTGCGCAAAGATGCCCGCCTCAAGTGGCTAAATCCCTGGGC
AAGCTTTCTAGACCAT
FMO07874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL30-RA | 696 | CG7038-RA | 97..636 | 9..548 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4648172..4648586 | 134..548 | 2075 | 100 | Plus |
| X | 23542271 | X | 4647967..4648095 | 9..137 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:50 has no hits.
FMO07874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:49 Download gff for
FMO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL30-RA | 83..635 | 1..556 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:12 Download gff for
FMO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL30-RA | 89..641 | 1..556 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:03 Download gff for
FMO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL30-RA | 89..641 | 1..556 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:03 Download gff for
FMO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4647959..4648094 | 1..136 | 97 | -> | Plus |
| X | 4648175..4648591 | 137..556 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:12 Download gff for
FMO07874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4541992..4542127 | 1..136 | 97 | -> | Plus |
| arm_X | 4542208..4542624 | 137..556 | 99 | | Plus |
