FMO07878.5prime Sequence
764 bp (764 high quality bases) assembled on 2009-08-11
> FMO07878.5prime
CAGTCGACATGTCTCTGACTATTACTTCCAGTGTCACTCATCCTGAGCTC
AAGGATCTGAGCACCGTTCGCAATGAACAAAAGGAACTGAACATTTCGCC
GGTTCACGATGTGAATGTCACAAAAGCCACGGCCACTTTCGGCATGGGTT
GCTTTTGGGGCGCAGAATCCCTGTATGGAGCCACCCGTGGAGTTTTGAGA
ACCACCGTGGGCTACGCCGGAGGCAGCTCGGATTTGCCAACGTACCGTAA
AATGGGCGATCATACGGAGGTGCTGGAAATCGACTATGATCCCAAGGTCA
TTAGCTTTAAGGAGCTGCTGGATCTGTTCTGGAACAACCATGAGTATGGC
CTGACCACGCCCATCAAGAGGCAGTACGCCTCCTTGATTCTGTACCACGA
TGAGGAGCAGAAGCAGGTGGCACACGCCTCCAAATTGGAGGAGCAAGAGC
GCCGTGCACCGGAGATCATAACCACTGAGATTGCATCCAAGGAGAACTTT
TACCCAGCCGAGGCGTACCACCAGAAGTATAGGTTGCAGGGCCACAAGGA
TCTCGCCTCATCGCTAAATCTCAGCCCCAAACTGCTGCAGACCAGCTATG
TGGCCACCAAACTGAATGGCTACCTGGCCGGAGTCGGCGGCATCGAGCAG
TTTAAGGCGGAGGCGGAGACCATGGGTCTGACGCCCACCCAGCGGCAGTA
CTGCTACTACCACGTGGAGCAGAACGAGGGCCAGGGTCTCTACTGCGCAA
GCTTTCTAGACCAT
FMO07878.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip71CD-RG | 980 | CG7266-RG | 67..805 | 8..746 | 3665 | 99.7 | Plus |
| Eip71CD-RA | 980 | CG7266-RA | 67..805 | 8..746 | 3665 | 99.7 | Plus |
| Eip71CD-RB | 968 | CG7266-RB | 67..793 | 8..746 | 3475 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15512476..15512739 | 254..517 | 1305 | 99.6 | Plus |
| 3L | 28110227 | 3L | 15512796..15513027 | 515..746 | 1160 | 100 | Plus |
| 3L | 28110227 | 3L | 15512171..15512366 | 59..254 | 965 | 99.5 | Plus |
| 3L | 28110227 | 3L | 15511118..15511169 | 8..59 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:02:43 has no hits.
FMO07878.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:46 Download gff for
FMO07878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 66..804 | 8..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:53 Download gff for
FMO07878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 67..805 | 8..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:48 Download gff for
FMO07878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip71CD-RA | 67..805 | 8..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:48 Download gff for
FMO07878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15511118..15511169 | 8..59 | 100 | -> | Plus |
| 3L | 15512172..15512365 | 60..253 | 99 | -> | Plus |
| 3L | 15512476..15512736 | 254..514 | 99 | -> | Plus |
| 3L | 15512796..15513027 | 515..746 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:53 Download gff for
FMO07878.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15505272..15505465 | 60..253 | 99 | -> | Plus |
| arm_3L | 15505576..15505836 | 254..514 | 99 | -> | Plus |
| arm_3L | 15505896..15506127 | 515..746 | 100 | | Plus |
| arm_3L | 15504218..15504269 | 8..59 | 100 | -> | Plus |
