FMO07880.5prime Sequence
1124 bp (1028 high quality bases) assembled on 2009-08-11
> FMO07880.5prime
CAGTCGACATGAACTTCTACGACGAGGAGATCACAATCGGCGGACCCGAC
TCCAAGCACCTGAGCAGTGTTCAAATGGAGCCCCGAAATGGAGGAACAGG
CGGTGGCAGAGGTGGTGCTGGCGGTGGTGGACCAGGAGCAGTGGGCGGAG
AAGGAGCTGTACGAAGAGCAGCCGCAGGCAGGCACCGTCGAATGTTCCAA
AACAACTCTACTGATGACGATGGTCTGCTGCAGGACATCATTGATCACGA
TGACGAGGCGGAGGACAGCGAGGATGACGATGACAGCGAGATGCAGCTGC
CCCAGGGCATGACCATGGGCGTGGGAATGACGGGTCTGGTGCCCGGGCCG
AACATGCAAAAGCGGCCGGGAAGCAACCGAAGTTCCAAGCAAGTACCGGA
TGACACCCTGAGCTCGGGCAGCGAGGAGGCCGCAATGGGTGGCAGAATGG
GATCCGGAGGAGCAAGAGGCGGAGCCAAGCTACCACATCAAAAGCTAACG
CTTCCCATGAGGGGAAGTGCTAGTGGAGCAGGAAGATCTAAGCGGCAGGA
TGATCAATCCTTTATTATGAGTGCCGACAAATGGGAGGATCTGTCCGTGC
CCGGAGAACTCAAGGAACTCTTTCCCTACATCGTCAAATACACCCCGCAA
ACGATCGATACTCCGTTTCACCTGCAACCTTTCATCCCCGAGTTTGTGCC
CGCTGTGGGTGATGTGGATGCCCTTCTGAAAGTCCAGGCTCCGCCTCTTT
TGCAGCCCCAACGCCAGAAAGGATCTGAACGATCACTTGGAGAAATTGGG
CTTATGGTTGCTCGATGAGCCCTCTGGCGCTCAAGTGAGCCCAGTCTGCT
GAATATGAAACTTCGGTCGGTACTGAGTGGCAGCATGGGGCGAAATCCGC
GTCACGCCTCCTCCGCATCACTGGTTCCCACCGCCCGATCGGGCAAGGAT
ATAGAGAAGTGATCCACTGAGGTGGAACAGTGCATATGACTCAGTCAATG
TACGATGTCAGCCAGAAGGAACATACATGCCCCTCTGAGATGCCGAAATT
CTTTGGCGATGAACAACCATATGCCCTTGATCAGCCTACGATCTGTCTGC
ACAGAACTTTCTGTACGGAATCTG
FMO07880.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15161-RA | 1643 | CG15161-RA | 287..1416 | 8..1121 | 5075 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18614693..18615509 | 1009..194 | 3895 | 99.3 | Minus |
| 2L | 23513712 | 2L | 18615634..18615820 | 194..8 | 935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:20:57 has no hits.
FMO07880.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:45 Download gff for
FMO07880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 241..1380 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:23 Download gff for
FMO07880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 280..1419 | 1..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:17 Download gff for
FMO07880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15161-RA | 280..1419 | 1..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:17 Download gff for
FMO07880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18614561..18615508 | 195..1124 | 96 | <- | Minus |
| 2L | 18615634..18615826 | 1..194 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:23 Download gff for
FMO07880.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18614561..18615508 | 195..1124 | 96 | <- | Minus |
| arm_2L | 18615634..18615826 | 1..194 | 97 | | Minus |
