FMO07881.5prime Sequence
1113 bp (1018 high quality bases) assembled on 2009-08-11
> FMO07881.5prime
CAGTCGACATGGCTGAGGAAGGACCACCGGAGCCGAGCATTGATTTTGTC
CCAGCTCTTTGCTTTGTACCACGCGGCGTGGCTAAGGATCGTCCCGACAA
GATCGTGCTGACGCAGGCGGAGCTGGCCAGGATTATCGGTGATACGCAAC
AGGAATTGGACGAGGAGAGCGACGACGATGCAGAGGAGGGCGAAAATGCC
GAGGAAGACCAAAACGACATGGATGTGGACGACCACGCGGATGCCAATAG
TGAGAACCGCGATCCGCAGGACGAGTTCCAATTCCAGGAGTATGACAACG
AGGCGAATGCTAATGTCACCAGTCTGGCCAACATCGTGGACGCTGGCGAG
CAAATCCCCGATGAGGACGAAGACTCCGAGGCCGAGGACGAGGTGATCAA
GCCCAGCGACAACCTCATTCTAGTGGGTCACGTTCAAGACGACGCCGCCT
CCATGGAGGTGTGGGTTTTCAACCAGGAGGAGGAGGCTCTCTACACCCAC
CACGACTTTCTGCTGCCAAGCTTTCCTCTGTGCATCGAGTGGATGAATCA
CGACGCGGGCAGCGAAAAGGCGGGCAACATGTGCGCCATCGGCTGCATGG
ATCCGATAATCACAGTCTGGGATCTAGACATACAGGACGCTATCGAGCCC
ACATTTAAGCTGGGTTCCAAAGGCAGCCGGAAGCAGAACAAAGAGCAGTA
TGGACACAGGACGCCGTGCTGGATCTCTCTTGGAACACCAACTTTGAGCA
CATTCTGGCCAGCGGGTCCGTGGACCAAACTGTGATTCTGTGGGACATGG
ACGAGGGCCAGCCTCATACAACCATTACCGCTTTTGGCAAACAGATTCAG
TCGCTGGAATTCCATCCGCAAGAGGCTCAAGCATTCTTACCGGCTGTGCC
GATGGATACGTGCGACTCTTCGATTGCCGCGACGCTGAGGGCGTCAACTC
GTCCAGCATTGAGTGAAAGTTGACGGTGAAGTGAGAGGTCCTGTGCATCC
ACACAGACGACTACTTCATCGTGGGCACCACGATGGCACTTGCATACCGC
CGACAACGTTCTCCTGGACAACTGCTGATCGTAAGCCTAACGAGAATTCT
CGGTGTGCTTCCA
FMO07881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nclb-RA | 1549 | CG6751-RA | 90..1169 | 9..1077 | 5095 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10875837..10876916 | 9..1077 | 4825 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:58 has no hits.
FMO07881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:44 Download gff for
FMO07881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6751-RA | 80..1167 | 1..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:03 Download gff for
FMO07881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nclb-RA | 86..1173 | 1..1082 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:44 Download gff for
FMO07881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nclb-RA | 86..1173 | 1..1082 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:44 Download gff for
FMO07881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10875833..10876920 | 1..1082 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:03 Download gff for
FMO07881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6763338..6764425 | 1..1082 | 98 | | Plus |
