FMO07883.5prime Sequence
1114 bp (980 high quality bases) assembled on 2009-08-11
> FMO07883.5prime
CAGTCGACATGGTTGTATCCGTGAAGGTCTTTAAGAAGGCCACGCCCAAC
GGCAAGGTCACCTTTTATCTGGGACGCCGCGACTTCATCGACCACATCGA
CTACTGTGATCCCGTCGATGGAGTGATTGTGGTGGAACCGGACTATCTAA
AGAACAGGAAAGTCTTTGGCCAACTGGCCACCACCTATCGCTATGGTCGC
GAGGAGGACGAGGTCATGGGAGTGAAGTTCTCCAAGGAGCTTATCCTGTG
CCGGGAGCAAATTGTGCCCATGACAAATCCCAACATGGAGATGACACCGA
TGCAGGAGAAGCTGGTCCGCAAACTGGGCAGCAACGCCTATCCGTTCACC
TTCCACTTCCCGCCCAATTCGCCCAGCTCCGTTACTCTGCAGCAGGAGGG
CGACGACAATGGCAAGCCCCTGGGCGTCGAGTACACCATCCGGGCATTTG
TGGGCGACTCCGAGGACGATCGCCAGCACAAGCGGAGCATGGTCAGTCTG
GTGATCAAGAAGCTGCAGTACGCTCCCCTCAATCGTGGCCAGCGTCTGCC
CAGCTCGCTGGTCAGCAAGGGATTCACCTTCTCGAATGGCAAGATCAGTC
TGGAGGTTACGCTGGACAGGGAGATCTACTATCATGGCGAGAAGACGGCT
GCCACCGTCCAGGTGTCGAACAACTCCAAGAAGTCCGTGAAGAGCATCAA
GTGCTTCATTGTGCAGCACACTGAGATCACCATGGTGAACGCCCAGTTCA
GCAAGCATGTGGCCCAGCTGGAGACCAAGGAGGGCTGCCCCATCACTCCG
GGCGCCAATCTCACCAAGACCTTCTACTTGATTCCGCTGGCGGCTAACAA
CAAGGATCGCCATGGTATCGCCCTGGATGGTCACTTGAAAGGACGAGATG
TCAACCTGGCCTTCATCCACCATGGTGCAGAAGGCAAGTCCACGGGAGAT
GCCTGTGTAATGTCATCCTCGTACTCGGTGCGCATTAAGCTCACCTGCGC
CACTCTGGAAGTGAAATGCAGACGAATGTGCCTCAGCTACTCAACCGGCC
ACTTGAAACCATTGAGAAAGATCGCTCGATGCCATTGAAGAAAATGAAGT
CATCGACAGCACGC
FMO07883.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arr2-RA | 1547 | CG5962-RA | 112..1221 | 9..1112 | 5005 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8647967..8648825 | 867..9 | 4280 | 99.9 | Minus |
| 3L | 28110227 | 3L | 8647734..8647903 | 1032..864 | 430 | 90.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:05:07 has no hits.
FMO07883.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:50 Download gff for
FMO07883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arr2-RA | 102..1222 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:28 Download gff for
FMO07883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arr2-RA | 102..1222 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:26 Download gff for
FMO07883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arr2-RA | 102..1222 | 1..1114 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:26 Download gff for
FMO07883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8647970..8648829 | 1..864 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:28 Download gff for
FMO07883.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8641070..8641929 | 1..864 | 99 | | Minus |
