FMO07884.5prime Sequence
1001 bp (1001 high quality bases) assembled on 2009-08-11
> FMO07884.5prime
CAGTCGACATGCTAGCGGTGAACCAGACGAAGAACACCCTACTCGATGGA
GCCTCCATTGAGGAAGAGCCGTACACAACTCCGCAGGAAAGCGAGGATTT
CTTTGAGAGTCTAGACAAACCGTCGAGGGAGCCAACACAACTGGCACCCA
GAAACACCTTCATCCGCGCCGGTGTGTTGACCACAGTGAGAGGTTCCGCC
TACATGGAGTATGGTAACACCAAGGTTCTGGCCATTGTGGCCCCGCCAAA
GGAGCTAATCCGCGCCAGCGCACGCAGAATGAACATGGGTGTTCTGAATT
GCTATGTGAATTTTGCGGCCTTCAGCACAGGGGATCTAGATTCGGTGCCG
GAACGGGAACGCCACCTGAGCAGCATGCTGACCAAGGCCATGGAGCCGGT
GGTGTGCCGCACGGAGTTCCTTAACTTTCAGCTGGACATACGGGTGCTTA
TTCTCGACGATGACGGCTGCCTGCTCAGCACTGCCATCAATTGCTGCGGA
GTCGCTTTGGTGGAGTGCGGCATTTCCACTTACGACTTAATTACGGCCTC
CACAGCTTGTATCTATCGGGATCACGTCTTCCTGAATCCCAGTGCCAAGG
TTGAGGAGCTGCTCTGGAAGCATCGCAACAGCAGCACCGATAGCACAACC
AGCCCATCATCCGCCCAGGAGCACGGCCTGATCATTACCGCCAGCATGGA
TACCTTTGAACAGATCGCCCAGTGCCAGCAGTGCGGATATCTCAGTCCAG
CCACCTATGTAAAGCTGCTGGATTACACCCTGGCCATTAACAAGTCCCTG
AGAGAACTAGTCAAAGGCGTGCTCACGAAGCGGGTGAAGGAGCAGCACGA
ACTAGATCTACGCGAGAAAGCCGAGACCGCTCTAGAAGATCAGCGTTTGG
AGGAAATATCGAGAAGCTAAAGAAGCAAGGACCAGAGGAGTTTATACATC
GAACATCCCGGGAGGATCCCTATGTAAGAGCAGGCAAGCCTTTCTAGACA
T
FMO07884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mtr3-RA | 1253 | CG8025-RA | 87..1056 | 9..977 | 4780 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19912602..19913420 | 977..160 | 3950 | 99.6 | Minus |
| 3L | 28110227 | 3L | 19913479..19913629 | 159..9 | 755 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:32 has no hits.
FMO07884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:50 Download gff for
FMO07884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 67..1043 | 9..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:46 Download gff for
FMO07884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 87..1063 | 9..986 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:32 Download gff for
FMO07884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mtr3-RA | 87..1063 | 9..986 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:32 Download gff for
FMO07884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19912595..19913420 | 160..986 | 99 | <- | Minus |
| 3L | 19913479..19913629 | 9..159 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:46 Download gff for
FMO07884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19905695..19906520 | 160..986 | 99 | <- | Minus |
| arm_3L | 19906579..19906729 | 9..159 | 100 | | Minus |
