FMO07885.5prime Sequence
1112 bp (1000 high quality bases) assembled on 2009-08-11
> FMO07885.5prime
CAGTCGACATGGCTGTCATCATCAGCTGCCTATTACTTCTCCTCGCGACA
GTGTCGCAGTCCAAGACCGTGGGTTACGATGCGGCTGCCGATCGCAATTT
GCTGGCTGCCGATCTCTACAACGCCGTGGCCGCCGATCATCTGAACGAAA
ATGTGGTCATCTCGCCAGCGACCATACAGAGTTCCATGGCGCTGGCCTTC
GTGGGGGCCAAGGGTCAGACGGCATCGGAGTTGCAGCAGGGGCTGCGTTT
AGGTCCTGGCGATGCGGATGCGGTGAGCCAGCGCAGCGGTAGTTACCAAC
AGGCCCTGACCCGCGACAACAACTTCCGGCTGGCCAACAACATTTACATC
AACGAGAACCTTGAGTTCAAGGGCTCCTTCAGGGACGTGGCCCAGCGCCA
GTTCGACTCGAACATCGACAAGCTGGACTTTCACCCGCCGTACAACAAGC
GCACGGCGGATGGCATCAACCGGGCGGTGGCCACCAAGACCAACGGCAAG
ATCACTGACATCCTCCGCGCCGAGCTGCTGAATGATCGCACCGAGGGAGT
GATCGTGAACGGCGTTTCCTACTCAGCCGCCTGGCAAAAGGCCTTCCGGC
TGGACAAGACCGAAAAGCGCTCCTTCCGCACCGGAAGCGGGCAGTCTGTC
AAGGTAGACACCATGTGGACGCTGCAGAACTTCAACTACGCCGAGGTCAA
CTCCCTGGACGCCAAGGTGGTGGAGCTGCCCTACCAGAACCCCGACTTCT
CCATGCTGCTGCTCCTGCCCAATCGCAAGGATGGTCTGAGATCCCTGCAG
CAGTCGCTGTCCGGTAAGAATCTTCTGGCCGAAATCGGAGCGATGAGCCA
GCAAAAGGTGGAGGTGCTGCTGCCCAAGTTTAGTGTCACCTTTGGCTTGG
GTTTGGAGGGACCATTCAAGAGGCTGGGCGTCCATACATGTTCTCGAGAG
ATGGTGACTTTGGCAACATGTACGCATGTTTGTCAGCCATTTCATAACGC
AGTGAGCCCAGCAATGGTGGAGTCACTGAGCTGCTGATCACCCTGGAACC
TGAATGCTAAGACTCTTTTTCCGCTCAAGAAGTTCAAGCGATCATCGTCT
GTTTCGCATAAG
FMO07885.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn43Ab-RB | 1329 | CG1865-RB | 78..1173 | 8..1085 | 4925 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7152260..7153148 | 921..33 | 4430 | 99.9 | Minus |
| 2R | 25286936 | 2R | 7151990..7152064 | 995..923 | 275 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:15 has no hits.
FMO07885.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:41 Download gff for
FMO07885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ab-RB | 48..1063 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:29 Download gff for
FMO07885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ab-RB | 70..1085 | 1..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:53 Download gff for
FMO07885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn43Ab-RB | 70..1085 | 1..1014 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:53 Download gff for
FMO07885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7151990..7152063 | 924..995 | 97 | <- | Minus |
| 2R | 7152258..7153144 | 37..923 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:29 Download gff for
FMO07885.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3039495..3039568 | 924..995 | 97 | <- | Minus |
| arm_2R | 3039763..3040649 | 37..923 | 99 | <- | Minus |
