FMO07890.5prime Sequence
1145 bp (948 high quality bases) assembled on 2009-08-11
> FMO07890.5prime
TTCTACTCCACGGCGCTGCTGGCGCTAGTTGGTTACCTGCTGATGAAATG
GCGAAGCACGATGAGGCACTGGCAGGATTTGGGTATTCCCTGTGAGGAGC
CACACATACTAATGGGAAGCATGAAGGGCGTACGAACCGCACGATCCTTT
AACGAGATCTGGACGAGCTATTACAATAAGTTCCGTGGCTCCGGACCCTT
TGCAGGTTTCTATTGGTTCCGGCGACCGGCTGTTTTTGTCCTGGAAACAT
CGCTGGCGAAGCAGATCCTGATCAAGGAGTTCAACAAGTTCACAGACCGA
GGCTTCTTTCACAATCCCGAGGATGATCCGTTGTCCGGTCAGTTGTTTTT
ACTTGATGGCCAAAAGTGGAGGACCATGCGAAACAAGCTCTCCTCCACAT
TTACGTCCGGCAAAATGAAGTATATGTTTCCCACTGTGGTCAAGGTGGCC
AATGAATTCACCGATGTTTTTGGCCAAAATGTGGCTAAGTCCCCTGTTGT
CGAAGTGAGGGAGCTGTTGGCGCGATTCACCACCGATGTTATTGGCACCT
GCGCCTTCGGCATCGAGTGCAGCAGCCTGAAGGACCCCGATGCAGAATTC
CGCGAGATGGGTCGACGATCCCTAACGGAGCAGCGCCTGGGACCAGTTGG
AATCGGATTCGTCAATAGCTTTCCCAATTTTGGCACGTTCGCCTCCATAT
GAAAATGACAGCGGAGCCCATCGAAAGGTTCTTCATGCGCATCGTTAGGG
AAACAGTGGCCTTCCGAGAGCAAAACAATATTCGTCGCAACGATTTCATG
GATCAGTTGATCGATTTGAAAAACAAACCACTGATGGTATCACATCCGGG
GAGAGTGTTAACCTAACCATCGAGGAGATCGCAACGCAGGCTTTTGTATT
CTTTTGCGGCTGGTTTCGAAACCTCGTCGACCACATGGGATTCGCACTGT
AGAACTGGCCAAATTCAGAACATTCAGAACCGGGTGAGGAAGGATGCCAG
AGGTTTATTGAAAAAGTGCAACGGGAGAGTTGAACTATTGAAAGATATGA
AGAATTTGTCTATCTGAACAAGCTTAATCGAAAACCTCGATTGTACCACG
GTCTTCCGGGCCCTGAATCCGGAATGCCTGGAAGGAACATTGAAG
FMO07890.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a21-RA | 1631 | CG10247-RA | 99..1230 | 1..1132 | 4920 | 96.5 | Plus |
| Cyp6a9-RB | 1964 | CG10246-RB | 129..1194 | 68..1132 | 1310 | 76 | Plus |
| Cyp6a2-RA | 1674 | CG9438-RA | 587..646 | 510..569 | 195 | 88.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14885813..14886841 | 1038..10 | 4565 | 98.4 | Minus |
| 2R | 25286936 | 2R | 14880317..14881244 | 994..68 | 1080 | 76.2 | Minus |
| 2R | 25286936 | 2R | 6780846..6780905 | 569..510 | 195 | 88.3 | Minus |
| 2L | 23513712 | 2L | 5623077..5623174 | 611..514 | 190 | 79.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:53 has no hits.
FMO07890.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:26:37 Download gff for
FMO07890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 103..1171 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:11 Download gff for
FMO07890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 99..1167 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:43 Download gff for
FMO07890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a21-RA | 99..1167 | 1..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:43 Download gff for
FMO07890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14885789..14886849 | 1..1063 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:11 Download gff for
FMO07890.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10773294..10774354 | 1..1063 | 97 | | Minus |
