FMO07902.5prime Sequence
398 bp (398 high quality bases) assembled on 2009-09-01
> FMO07902.5prime
CAGTCGACATGCTTTTCGATGGCGCAGCCGGCAATAGGCAGGGTCAGGGC
CAGAATGCCCTGAAGCCATTGGTACAAGGCCAGGAGGAGCCCGCCCTATG
CGAGCAGTACTATCTGCTTGGCGATGGTTCCATCGTTCTGCGCAACCTTC
GCACCGACTTGTCCAATCCGCGCCTGGAGAGAGTGAAATCGCGCTGCTGC
CAGCGCCAAACGCTCATCCACGACATATGCGTCAACTGCGTGATGGATCT
CTGCGAGGAGTGTGGCTACTCCTGCGGCGAGTGCTCCAGGTTCATTTGCC
GCAGCTGCGTGACTTTATTTGGTAATCGAGTTGAAGAAGAGAAGGATCCC
CTGTGCGAGCACTGCCAGATGTTCTTCAGCGCAAGCTTTCTAGACCAT
FMO07902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13373-RB | 812 | CG13373-RB | 323..694 | 9..380 | 1860 | 100 | Plus |
| CG13373-RA | 743 | CG13373-RA | 254..625 | 9..380 | 1860 | 100 | Plus |
| CG3176-RD | 627 | CG3176-RD | 75..437 | 9..380 | 1295 | 90.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 477621..477931 | 9..319 | 1555 | 100 | Plus |
| X | 23542271 | X | 479644..479945 | 9..319 | 1040 | 89.7 | Plus |
| X | 23542271 | X | 482132..482433 | 9..319 | 1025 | 89.4 | Plus |
| X | 23542271 | X | 478013..478073 | 320..380 | 305 | 100 | Plus |
| X | 23542271 | X | 482518..482578 | 320..380 | 245 | 93.4 | Plus |
| X | 23542271 | X | 480030..480090 | 320..380 | 230 | 91.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:11 has no hits.
FMO07902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:39 Download gff for
FMO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RB | 152..540 | 1..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:09 Download gff for
FMO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RA | 246..634 | 1..389 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:11 Download gff for
FMO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13373-RA | 246..634 | 1..389 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:11 Download gff for
FMO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 477613..477931 | 1..319 | 99 | -> | Plus |
| X | 478013..478082 | 320..389 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:09 Download gff for
FMO07902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 371646..371964 | 1..319 | 99 | -> | Plus |
| arm_X | 372046..372115 | 320..389 | 95 | | Plus |
