Clone FMO07905 Report

Search the DGRC for FMO07905

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:79
Well:5
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG1943-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07905.5prime Sequence

380 bp (380 high quality bases) assembled on 2009-09-01

> FMO07905.5prime
CAGTCGACATGACATCCACCGAGCTGAAAATCGGCCTGACCACCAGTGCC
CGTCCCTCCAGCCGAGTGCTGAAGCCCCCAGGCGGCGGACACACCAATAT
CTTCTCGGAGCCCGACGTGGCCGTTCCCGCCCCGCGTGCCAAGTACAACC
AACAGAACTCCTCAAACCTCAATGCCTGCATGGGCTCCACGGATCCCAAC
AAGGTGGTGGAGAAAATTCGCGAAGAGGTCTCCATCCAGAAGGAGGAGGC
CAAGTCCGCCCCACCCAGCCAGCCCAAGGAGCCGGCGAACAAACCAGCGG
CCACAAATGGAGAGGCACGCGGCCGAGTTCCACCCGGCGGATTCTCGTCG
GGCGGATTCTGGGCAAGCTTTCTAGACCAT

FMO07905.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG1943-RD 1207 CG1943-RD 145..498 9..362 1770 100 Plus
CG1943-RC 985 CG1943-RC 113..466 9..362 1770 100 Plus
CG1943-RB 991 CG1943-RB 119..472 9..362 1770 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7076919..7077272 9..362 1770 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:50:54 has no hits.

FMO07905.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:37 Download gff for FMO07905.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1943-RA 157..520 1..362 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:47 Download gff for FMO07905.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1943-RB 109..472 1..362 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:59 Download gff for FMO07905.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1943-RB 109..472 1..362 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:59 Download gff for FMO07905.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7076909..7077272 1..362 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:47 Download gff for FMO07905.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2902631..2902994 1..362 98   Plus