Clone FMO07907 Report

Search the DGRC for FMO07907

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:79
Well:7
Vector:pMK33-CFH-BD
Associated Gene/TranscriptGgamma1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07907.5prime Sequence

236 bp (236 high quality bases) assembled on 2009-09-01

> FMO07907.5prime
CAGTCGACATGGACGTAATGTCATCATCCCTGCAGCAGCAGCGCGTCGTG
GTGGAGCAGCTGCGTCGCGAGGCTGCCATCGACCGCCAGACGATCTCGGA
GTCATGCGCTAAGATGATGAAGTACATCACGGAGCACGAGCAGGAGGACT
ACCTGCTCACCGGGTTCACCAGCCAGAAGGTGAATCCCTTCCGCGAGAAG
TCGTCCTGCACCGTTCTCGCAAGCTTTCTAGACCAT

FMO07907.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:28
Subject Length Description Subject Range Query Range Score Percent Strand
Ggamma1-RC 831 CG8261-RC 48..258 8..218 1055 100 Plus
Ggamma1-RB 1084 CG8261-RB 301..511 8..218 1055 100 Plus
Ggamma1-RA 2554 CG8261-RA 110..320 8..218 1055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8902347..8902557 8..218 1055 100 Plus
Blast to na_te.dros performed 2014-11-28 19:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 1526..1564 24..64 101 75.6 Plus

FMO07907.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:23:35 Download gff for FMO07907.5prime
Subject Subject Range Query Range Percent Splice Strand
Ggamma1-RB 324..545 1..223 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:16 Download gff for FMO07907.5prime
Subject Subject Range Query Range Percent Splice Strand
Ggamma1-RA 103..324 1..223 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:59 Download gff for FMO07907.5prime
Subject Subject Range Query Range Percent Splice Strand
Ggamma1-RA 103..324 1..223 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:59 Download gff for FMO07907.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8902340..8902561 1..223 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:16:16 Download gff for FMO07907.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4789845..4790066 1..223 97   Plus