FMO07920.5prime Sequence
743 bp (743 high quality bases) assembled on 2009-09-01
> FMO07920.5prime
CAGTCGACATGGTCACATACAATACTCTAATACAGAACGAAAAGAATGAA
AATGTGGTCGCCCCGATAAGCCGGCCATTCGCCAGAAAGAGGAGGACTGA
GATTCGCCGCCTGCAGTCCAACAGGCGGTTGAATAAAAAGGTGTGCAAAC
ACCATTTGGACATTGCCCATTGTACCCAGAAGAAGGCTCCATGGCGGAAT
TGGGCATACCTCATTCTCGCCCTCGCCGCAGGAATTGGCATGTTATTGCA
GTTCACCGACAAGTTGTCCACGGTCAGCGGATTCCTGGAAAGCTACAAAA
ACCAGTACCACTCGATCGTCCACAACCAGGACAACTACTGCAATCCCTCC
CGACGGCTGGGCGACATGGTCCTGCACGCCCGCCACCAGGTACTCAACCA
GGATCTTGCATTGAACCAGCTAGAACTGGCACTGGACAACACCACCAATG
AGGCAATCGTCTTGGTGGGCACCTCTGGCGTAGGCAAGAGCCACACTGCG
CGAATCTTGCGCGAAACGTTTCCCTGGCCCGAGAACGTGAATACACTCTC
CTGGACCGGCAGTTCTTCTTTGGGCCGAGTGAAGAGCATGCTATCCGGCC
TGACATATTGCGGACAGAATATGATCTTGATTGATAACATGACGCCGAAG
GATGCACACTTCGTGCCTATCATTAACGAAATGATAAGTGAGGGCGAAAA
GAGCGCCAACCACACTGAGCATCCGGCAAGCTTTCTAGACCAT
FMO07920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4880-RA | 1700 | CG4880-RA | 150..866 | 9..725 | 3585 | 100 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 150..531 | 9..390 | 1910 | 100 | Plus |
| CG4880-RB | 1505 | CG4880-RB | 529..803 | 451..725 | 1375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16886967..16887411 | 9..453 | 2225 | 100 | Plus |
| X | 23542271 | X | 16887621..16887895 | 451..725 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:14 has no hits.
FMO07920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:07 Download gff for
FMO07920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 138..857 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:36 Download gff for
FMO07920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..869 | 9..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:08 Download gff for
FMO07920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4880-RA | 150..869 | 9..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:08 Download gff for
FMO07920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16886967..16887410 | 9..452 | 100 | -> | Plus |
| X | 16887623..16887898 | 453..729 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:36 Download gff for
FMO07920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16781000..16781443 | 9..452 | 100 | -> | Plus |
| arm_X | 16781656..16781931 | 453..729 | 99 | | Plus |
