FMO07924.5prime Sequence
689 bp (-60 high quality bases) assembled on 2009-09-01
> FMO07924.5prime
GAACCCAAGTGGACGCCCTTATGATGCGGCCGATCTCGAAACTAAGCATG
CTGCTCACTGTGGTGTCCATTCTGTGGCGCTTCGTCTCGATTTGCATCAA
CTGGAGCCTGGCGTACGTGTACTGGATGGAGGAGTCCTACGGATACTGCG
CCTGGACCATTGGCTCCATTCTGGTGCCCATGGTGGTCACATCGGTCATA
TATATACATACCTTGAAGAGCGCTCATGCCGGCCAAAAACGCATCCTGGA
GCGAGGGGTGTACTCAAATGCTGTGATCTCATATCTCTTCCGCCATGTCT
ATGTCCTAAACTATGCGTTCAAATACTCGTTGGCCAAGGAGCGGGATGAC
AAGCAGGCGGAGATCGAATATTACCAAAAACTCATGACGGAGGAGTGCTA
TGTTAGTTTCGTTCGTCTATTCGACTCCTTTTTGGAATCACCACCGCACA
AAATACTACAGCTGGCAATTCTTTTTGCTATCTCATTGGAGTTCACATAC
TACCGCCACATTGCCCTGATCGTCTACTTCGGCAACATAACGTGTTGCAT
CCAGACTTTCAATCACTCCAATCGCCCTGGCCCAACTGGACAAACATGAA
TATTGCGGCGAAAGGGACAATTCTCTGCAATTTCCTCTTTCCTGCTCTGC
CCTCACTGTTTTCAAGAACGCTTTTGCATCGCGTATGTT
FMO07924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32579-RA | 1296 | CG32579-RA | 202..880 | 1..688 | 2900 | 95.8 | Plus |
| CG32579-RB | 1317 | CG32579-RB | 202..854 | 1..660 | 2825 | 96.1 | Plus |
| CG32579-RC | 1009 | CG32579-RC | 202..852 | 1..658 | 2815 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16323487..16323697 | 1..211 | 1025 | 99.1 | Plus |
| X | 23542271 | X | 16323774..16323929 | 212..367 | 750 | 98.7 | Plus |
| X | 23542271 | X | 16324079..16324186 | 368..475 | 480 | 96.3 | Plus |
| X | 23542271 | X | 16324442..16324560 | 492..612 | 385 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:03:20 has no hits.
FMO07924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:12 Download gff for
FMO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 200..878 | 1..689 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:56 Download gff for
FMO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 202..880 | 1..689 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:07 Download gff for
FMO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32579-RA | 202..880 | 1..689 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:07 Download gff for
FMO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16324449..16324601 | 499..658 | 91 | -> | Plus |
| X | 16323487..16323697 | 1..211 | 99 | -> | Plus |
| X | 16323774..16323929 | 212..367 | 98 | -> | Plus |
| X | 16324079..16324209 | 368..498 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:56 Download gff for
FMO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16218112..16218242 | 368..498 | 93 | -> | Plus |
| arm_X | 16217520..16217730 | 1..211 | 99 | -> | Plus |
| arm_X | 16217807..16217962 | 212..367 | 98 | -> | Plus |
| arm_X | 16218482..16218634 | 499..658 | 91 | -> | Plus |
