FMO07925.5prime Sequence
662 bp (662 high quality bases) assembled on 2009-09-01
> FMO07925.5prime
CAGTCGACATGAGCCACTTGGGCCTTGCGGATGTGCACCAGTCCGAGGAT
GCCACTCCTGACCTGGAATCCTTCACTGGCTTCGGCAACTCCGCCGCCGA
GGCCTTCATTCAAAGTCTCGCAGGAATGGTGAATCAGGGCGATGTGGAGA
CCATGATACGGGCTCAAAAGCAAATGCTGCAACGCTTTGAGAAAACCAAC
GAGATGCTGCTCAACTGCAATGCCTTATCGCAGAGTCGTTTGAAAAGTGC
CAGCGAGGATTTCAAAAGACACGTGAAATGCCTGAGCGAAATGAAGAAGG
ATCTGGATTACATATTCCGCAAGATACGGATCATCAAGCAGAAGCTACAG
TCGCAGTTTCCCGCCATTTACGCCGAAGTTCAGCCGCAGCGTAGCAGTTT
GGCTGAGGAAGCCGAGGATGATACGGAAGCCCAGGCTAAAAAGACTGCAG
AAACACCTGCTCCTGCTGCCGCAAAACCTGTCCTATCCACCAAGAAAAGT
GCCGCCACCATAGAGTACGTGCAGATGGAGGAGGCAGTGGACAATGGCAC
TGTGGAGATCGAAAACGAGCTGATCAAGCGAGTTTGTTCCGTGGAAACTG
CCAATCCCAATGATTCCTCCGACTGCACATCCGAGGATACAGGTGCAAGC
TTTCTAGACCAT
FMO07925.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10681-RB | 1027 | CG10681-RB | 217..852 | 9..644 | 3180 | 100 | Plus |
| CG10681-RA | 1023 | CG10681-RA | 213..848 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12502004..12502472 | 176..644 | 2345 | 100 | Plus |
| 3L | 28110227 | 3L | 12501781..12501948 | 9..176 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:56 has no hits.
FMO07925.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:05 Download gff for
FMO07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 116..768 | 1..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:23 Download gff for
FMO07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 205..856 | 1..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:57 Download gff for
FMO07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10681-RA | 205..856 | 1..656 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:57 Download gff for
FMO07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12501771..12501947 | 1..175 | 97 | -> | Plus |
| 3L | 12502004..12502480 | 176..656 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:23 Download gff for
FMO07925.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12494871..12495047 | 1..175 | 97 | -> | Plus |
| arm_3L | 12495104..12495580 | 176..656 | 98 | | Plus |
