Clone FMO07927 Report

Search the DGRC for FMO07927

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:79
Well:27
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07927.5prime Sequence

191 bp (191 high quality bases) assembled on 2009-09-01

> FMO07927.5prime
CAGTCGACATGACCGCCCCCTGCTTTGTGGGCGTCTCCTATCTACTGCTG
CTCCAGACCTACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGAT
CGCCCTTTACCTGACCGAGGTGTGGTATGCCATCGTCTTCGTTTTCTCGC
TGTGTCGTCCAGTAACTTATGATGCAAGCTTTCTAGACCAT

FMO07927.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11760-RB 1908 CG11760-RB 417..582 8..173 830 100 Plus
CG8116-RC 1826 CG8116-RC 1316..1481 8..173 830 100 Plus
CG8116-RB 2812 CG8116-RB 1321..1486 8..173 830 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8719829..8719994 8..173 830 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:28:57 has no hits.

FMO07927.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:04 Download gff for FMO07927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 410..586 1..179 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:29 Download gff for FMO07927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8116-RA 1314..1490 1..179 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:59 Download gff for FMO07927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8116-RB 1314..1490 1..179 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:59 Download gff for FMO07927.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8719822..8719998 1..179 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:29 Download gff for FMO07927.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4545544..4545720 1..179 96   Plus