FMO07933.5prime Sequence
1127 bp (997 high quality bases) assembled on 2009-09-01
> FMO07933.5prime
CAGTCGACATGGCTGAGGGTAATACCGCTGGCGGAGAGGACCAAAAGCTG
ACGGACATCTTTCTAAAGGGCTGGAACATATTCGACGAGCTAGAAGTTAC
CGAACTGCCCTTCAATGGCAGCGAATTTCAGAACAAAGTGAAGACTGCAA
TGGGCCTTTTCGAGCAGGCCACCGTCATTGTGAACCAGGTTAGCATGTTC
AGTGCCAACGAGTTGATCGACGAGGTGTCCACGGAATCGCTACCATTCAT
GCTGCTCCCTTACTTTCTGGGCAAGCTTACCACTAAGATCAACAGCCCCA
ATAACACACACTCCATAGAGCTGGGCGAGATTTACTTCAAGGACCACCTG
CAGCGTTGCCAGGAGTATGATCTCTGTGCAGCGCCCAAATCTCAGGTGGC
TAAGGCGGATAGCCAAGCGGAAAAAAGCGAGCAGCGCGAGCTGGTAGAGG
CAGCCTTCAATAGAAACGACAAAATAGCCCAGTATCGCCGGATGAAGGAG
ATTGACGAGTATATGGCCAGAATGCGCGATGCAGTCAAGAACAAAACGGT
CGACGATGAGGATAAACGTGTCTTTTTCCTCAAGTATTTGGACAAGAGTA
TAATAGACTCCAAGCAGGAATTAGAAACATTGGGCGTAATGAAGCAGCTG
GCCCAGATGCGCCTTGCCCGATTGGCTGGTGGCGAATCCGACAACGAAGT
GGATTCGTTCCGTCCACCGAATCAAAATCAATCTTCTGCATCGTCCACCT
CCCGCGGTCATGGTCACAGCCACGGACCCGGACACCACCACCATCATCAG
CAGGCCGCTAAGCCAAAGCCCTTGCAGCCCTTCATCATAACACGTAATGC
CACCCAGAAGCGGTTTTCGGCTTGGGATACCCCAGTTTGCCCATTATGAC
TGTTGATGATTTCTACCAGCAGCGCGTCGACGAGGGCATCTTTCCTGATG
AGGAGAATGTTGCCAGATGAATCAGCACAGGCCATCGCGGCCGCCCGGGA
TCCCACGAAAAGAGACGAGAGAAGCCGTTGAGGAGCTACGGCGGAGCAGA
TGAATCCCGAGTTATAGACCGCATGAGGCGCATGATGAATACCAAGGATG
TGGTGCCTCCGGTGACGGCAACCGTCT
FMO07933.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tap42-RA | 1335 | CG31852-RA | 108..1236 | 9..1126 | 5235 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13367915..13368922 | 130..1126 | 4320 | 97.5 | Plus |
| 2L | 23513712 | 2L | 13367724..13367846 | 9..131 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:21 has no hits.
FMO07933.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:59 Download gff for
FMO07933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 109..1237 | 9..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:41 Download gff for
FMO07933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 108..1236 | 9..1127 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:27 Download gff for
FMO07933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tap42-RA | 108..1236 | 9..1127 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:27 Download gff for
FMO07933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13367724..13367846 | 9..131 | 100 | -> | Plus |
| 2L | 13367917..13368922 | 132..1127 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:41 Download gff for
FMO07933.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13367724..13367846 | 9..131 | 100 | -> | Plus |
| arm_2L | 13367917..13368922 | 132..1127 | 98 | | Plus |
