FMO07934.5prime Sequence
598 bp (598 high quality bases) assembled on 2009-09-01
> FMO07934.5prime
CAGTCGACATGCGTACCATTAATTCCAACCAGTGCGTGAAGATCCCTAAG
GATATCAAGGCCTCGGTGAAGGCCCGTGTGGTGACCATCACCGGCACCCG
CGGCACCCTGAAGCGCAGCTTCAAGCACTTGGCTCTGGACATGTACATGC
CCGACAAGCGCACCCTGAAGGTGGAGAAGTGGTTCGGAACCAAGAAGGAG
TTGGCCGCCGTCCGCACCGTCTGCAGTCACATCGAGAACATGATCAAGGG
AGTCACGTTTGGATTCCAGTACAAGATGCGTGCTGTGTACGCCCATTTCC
CCATCAACTGTGTCACCTCCGAGAACAACACGGTCATTGAGATCCGTAAC
TTCTTGGGTGAGAAGTACATCCGTCGTGTGGAGATGGCTCCTGGCGTCAC
CGTGGTCAACTCCACTGCCCAGAAGGACGAACTTATCGTGGAGGGAAACG
ATATTGAGTCTGTCTCCGGATCTGCCGCCCTCATCCAGCAGTCCACGACC
GTCAAGAACAAGGATATCCCGTAAGTTCCTTGACGGTCTGTACGTGTCCG
AAAAGACGACCGTTGTGAAGCTAGAGTCTGCAAGCTTTTCTAGACCAT
FMO07934.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL9-RC | 807 | CG6141-RC | 86..655 | 9..579 | 2815 | 99.6 | Plus |
| RpL9-RB | 798 | CG6141-RB | 159..728 | 9..579 | 2815 | 99.6 | Plus |
| RpL9-RA | 761 | CG6141-RA | 122..691 | 9..579 | 2815 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11002910..11003239 | 579..249 | 1590 | 99.4 | Minus |
| 2L | 23513712 | 2L | 11003510..11003751 | 250..9 | 1210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:09 has no hits.
FMO07934.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:07 Download gff for
FMO07934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL9-RA | 115..700 | 1..589 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:50 Download gff for
FMO07934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL9-RA | 115..700 | 1..589 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:00 Download gff for
FMO07934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL9-RA | 115..700 | 1..589 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:00 Download gff for
FMO07934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11003511..11003758 | 1..249 | 98 | | Minus |
| 2L | 11002901..11003238 | 250..589 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:50 Download gff for
FMO07934.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11002901..11003238 | 250..589 | 98 | <- | Minus |
| arm_2L | 11003511..11003758 | 1..249 | 98 | | Minus |
