FMO07936.5prime Sequence
937 bp (937 high quality bases) assembled on 2009-09-01
> FMO07936.5prime
CAGTCGACATGGCCCAAACGGAAGTGCTGGTGTTCGGCTCGGCCATCATT
GACTTTATAAGCTACACGACCCGTCTACCGAAAGCCGGAGAAACGCTCCA
TGGGCATCGCTTTCAGATTGGCTACGGCGGCAAGGGCGCCAATCAGTGTG
TGGCTGCCGCGCGCCAGGGATCCCGAACAGCTCTGGTGGCCAAACTGGGG
GCAGACACATTCGGCAGCGACTACCTGAGACATCTGCGCGAGGAGCGCGT
CAATGTAAACCACGTCGAGCAGCTGGCGGAGGAAACGACGGGCGTGGCCC
AGATAGCCGTGTCAGATGGCGGCGAGAACAACATCATCATTGTGGTGGGC
GCCAACAATCGACTGAGCTCGTGTGACGTTTCCTCGGCGAAGGCGCTCTT
CCAGGAAGCCAAAGTTCTGGTGTGCCAGCTGGAGACGCCCGTTGAGGCCA
CCCTGACCGCTCTGAGAGCCTTCCGGGGCGTGTCCATCGTCAATGCGGCT
CCGGCCATGGCCGACACACCCCCCGAACTTCTTCAGTTGGCCAGCATCTT
CTGTGTGAACGAAAGCGAGGCGGCACTGATGACTCAGATGCCCGACATTG
GCAACATAGAGCACGCCGAAGATGCGGTTGGAAAGCTGATAGCGGCAGGT
GCCAACACGGTGATCATAACTCTGGGCAAACTAGGAGCCGTTTTCGGTTC
CGCCGACTCCAAGGGCGTGTGCCAGCATGTGGCTGCGCCGAGTGTGCCGC
CCGAAAAAGTGGTGGACACGACGGGGGCTGGAGACGCCTTCATTGGGACC
TTGGCCCACAACTTGGCCCGTCATCCAACGAGGAAACTGGAGGAGCACAT
AGCCGCCGCCTGTGCCGTGGCCTCGCAATCCGTTCAGCTACCCGGGACGC
AGTCGAGCTTCCCACACGCTGCAGCTTTCTAGACCAT
FMO07936.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13369-RA | 1175 | CG13369-RA | 215..1126 | 9..920 | 4545 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 623794..624345 | 60..611 | 2760 | 100 | Plus |
| X | 23542271 | X | 624407..624716 | 611..920 | 1535 | 99.7 | Plus |
| X | 23542271 | X | 623682..623734 | 9..61 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:42:50 has no hits.
FMO07936.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:19:06 Download gff for
FMO07936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13369-RA | 211..1130 | 1..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:49 Download gff for
FMO07936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13369-RA | 210..1129 | 1..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:32 Download gff for
FMO07936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13369-RA | 210..1129 | 1..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:32 Download gff for
FMO07936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 623677..623734 | 1..61 | 95 | -> | Plus |
| X | 623796..624344 | 62..610 | 100 | -> | Plus |
| X | 624407..624719 | 611..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:49 Download gff for
FMO07936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 517710..517767 | 1..61 | 95 | -> | Plus |
| arm_X | 517829..518377 | 62..610 | 100 | -> | Plus |
| arm_X | 518440..518752 | 611..924 | 99 | | Plus |
