Clone FMO07943 Report

Search the DGRC for FMO07943

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:79
Well:43
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17107-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07943.5prime Sequence

314 bp (314 high quality bases) assembled on 2009-09-01

> FMO07943.5prime
CAGTCGACATGAAGTTCCTGGCTATCTGCATTTTTCTAATCTTCGCCCTG
GTGGCCGTTCAGGCACATCCTGGTGGATTCGGCGGATTCGGTGGAGGCGG
TGGTGGCGGTGGTCGCGGTGGAGGCGGTGGAGGCGGTGGAGTCGGTGGAG
TCGGCGGTTCGAACGCAGTTGCCAACGCGAATGCCGCTGCAACCGCCGAC
AGCAGAGGAGGCGGCCCAGCTTCCGCCTCGGCCTCGGCCACTGCAACCGC
CAACGCCAGCTCCGGAGGAGGTGGAGGTGGACATGGCAGACATGGAGCAA
GCTTTCTAGACCAT

FMO07943.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG17107-RC 563 CG17107-RC 26..313 9..296 1440 100 Plus
CG17107-RB 482 CG17107-RB 90..377 9..296 1440 100 Plus
CG17107-RA 418 CG17107-RA 26..313 9..296 1440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10681991..10682278 9..296 1440 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:30:46 has no hits.

FMO07943.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:20 Download gff for FMO07943.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 19..312 9..303 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:07 Download gff for FMO07943.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 26..319 9..303 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:02 Download gff for FMO07943.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17107-RA 26..319 9..303 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:02 Download gff for FMO07943.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10681991..10682284 9..303 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:07 Download gff for FMO07943.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10681991..10682284 9..303 98   Plus