FMO07947.5prime Sequence
710 bp (710 high quality bases) assembled on 2009-09-01
> FMO07947.5prime
CAGTCGACATGTCCTTTCTTTCGCCCACACTGCGCCTGGAGAATCTGTCC
ACGCAGCCCACGATGACGCAGGATCATGTGCCCGAGGACCAGCGCTATAA
CAAACAGAATATTGTGGCTCAATGGTGTGTGCCCATCAATGGCAAGATGT
ACCGCATCGAGCTGGAACATGGCACAACCAGTGGGCGGCGCATGATTTGG
GTCAATGGACGGGAAGTCCTGCGTCGCGACTGGATGTTCAAACTGGTTGG
CGAAGACACCTTTCACATCGATCAGACGCGCTGCATCATACGCGTTGATC
CTGCGCCGGGCTTCAAATACGAGTACTCCCTCTACATCGACGGCAAATCG
CACGACCAGTACACCGAGGACATGACACGGCAATATCGACTGTGGCTATA
TACGGATGATGCGGCCGCCGATGCGCCGCAGGAATATAGAATAATGCTCA
AACTGGACACGCTGAGTCTCTACGTAAACGATGAGCTGCGCACCGAGGAG
TCGGTTTTTGTTCACGGCGGCACAAACACCAAGTTCCTGCTGCAAGACAC
GGAATTCGTGCTTCAGGCACGCTCAAGTGGCAATAAACATGATGGCATCG
TTCACACTCTGCTGGCGAATGGGGTGGCAGTTCCGGAAGCGAAGATTCAG
GAGATTATGCAAGAGCCGGTCTCCATTTTGCAGAGCAGCAACGCAAGCTT
TCTAGACCAT
FMO07947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10257-RA | 1377 | CG10257-RA | 554..1238 | 8..692 | 3380 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14943770..14944058 | 212..500 | 1445 | 100 | Plus |
| 2R | 25286936 | 2R | 14944137..14944330 | 499..692 | 925 | 98.5 | Plus |
| 2R | 25286936 | 2R | 14942951..14943089 | 8..146 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 14943197..14943265 | 145..213 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:04 has no hits.
FMO07947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:59 Download gff for
FMO07947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 335..1025 | 1..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:20 Download gff for
FMO07947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 548..1238 | 1..692 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:39 Download gff for
FMO07947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10257-RA | 548..1238 | 1..692 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:39 Download gff for
FMO07947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14942945..14943089 | 1..146 | 97 | -> | Plus |
| 2R | 14943199..14943264 | 147..212 | 100 | -> | Plus |
| 2R | 14943771..14944058 | 213..500 | 100 | -> | Plus |
| 2R | 14944139..14944330 | 501..692 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:20 Download gff for
FMO07947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10830450..10830594 | 1..146 | 97 | -> | Plus |
| arm_2R | 10830704..10830769 | 147..212 | 100 | -> | Plus |
| arm_2R | 10831276..10831563 | 213..500 | 100 | -> | Plus |
| arm_2R | 10831644..10831835 | 501..692 | 98 | | Plus |
