FMO07948.5prime Sequence
323 bp (323 high quality bases) assembled on 2009-09-01
> FMO07948.5prime
CAGTCGACATGTCGCAATCCGATAACGTGGCACGTGAGCAAACTGCGGCA
AATGCAGGGCCGGATGCATGTCAAGGATGCCGCGGCCAATTGCCAAATGC
CACGCCCGTGGAAGTCGAGGACATGGCCTTGCCGTCGATGGAGCGTCTCA
TTCGAAAGGCCAACATGGCCCAGAAAATGCTGAACGATGTGATGAAACAG
ATCCAGAAGCAGCAGCAGCAGGAATCTCAACTCTCCATCAAGGAGACCAA
GTCCAAGCACCGCAGCTCCGATGGAGTTCCAGTTCCGACCACAGTGACTG
CGAGCGCAAGCTTTCTAGACCAT
FMO07948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8620-RA | 712 | CG8620-RA | 149..445 | 9..305 | 1485 | 100 | Plus |
| CG8620-RB | 775 | CG8620-RB | 148..415 | 9..276 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7158247..7158514 | 9..276 | 1340 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy8 | 4955 | gypsy8 GYPSY8 4955bp | 1731..1794 | 182..245 | 104 | 62.5 | Plus |
FMO07948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:58 Download gff for
FMO07948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:23 Download gff for
FMO07948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:52 Download gff for
FMO07948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8620-RA | 140..452 | 2..312 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:52 Download gff for
FMO07948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7158238..7158514 | 2..276 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:23 Download gff for
FMO07948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7151338..7151614 | 2..276 | 98 | -> | Plus |
