FMO07950.5prime Sequence
446 bp (446 high quality bases) assembled on 2009-09-01
> FMO07950.5prime
CAGTCGACATGAATTTTCTGCGGCAATCCTTTGGCATTACGAAACAGTTG
GCTTCGCAGGCCATCCAGTGCAGCTATGAGACCGCCGTCCGTGGAATGGC
ATCGCTGCAGCAGATGCACCGCAGCGGACCGCACATAAAGACGCGTCCGC
CGCGCCAGCCGCTGGATGGAAAGCCCTTCGCCAAGGGCGTTGTCCTGAAG
ACGCTGATAAAGAAGCCCAAGAAGCCGAACTCGGCCAATCGAAAGTGCGT
GCTGGTGCGCCTCTCCACCGGCAAGGAGATGGTGGCCTACATCCCCGGCA
TCGGGCACAACCTGCAAGAGCACAACATTGTACTGTGCCGCGTGGGGCGT
CTGCAGGACGTGCCCGGCGTTAAGCTGAAGGCTGTGCGCGGAGTCTACGA
CTTGGCGCACGTCGTCAAGAAGAGCCAAGCAAGCTTTCTAGACCAT
FMO07950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-RB | 663 | CG7925-RB | 191..611 | 8..428 | 2105 | 100 | Plus |
| tko-RC | 1596 | CG7925-RC | 1176..1544 | 60..428 | 1845 | 100 | Plus |
| tko-RC | 1596 | CG7925-RC | 191..244 | 8..61 | 270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2442365..2442733 | 428..60 | 1845 | 100 | Minus |
| X | 23542271 | X | 2443734..2443786 | 60..8 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:28 has no hits.
FMO07950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:15 Download gff for
FMO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RB | 185..616 | 1..436 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:25 Download gff for
FMO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RB | 185..616 | 1..436 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:31 Download gff for
FMO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RB | 185..616 | 1..436 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:31 Download gff for
FMO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2442360..2442732 | 61..436 | 98 | <- | Minus |
| X | 2443734..2443790 | 1..60 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:25 Download gff for
FMO07950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2336393..2336765 | 61..436 | 98 | <- | Minus |
| arm_X | 2337767..2337823 | 1..60 | 93 | | Minus |
