Clone FMO07955 Report

Search the DGRC for FMO07955

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:79
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32726-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO07955.5prime Sequence

206 bp (206 high quality bases) assembled on 2009-09-01

> FMO07955.5prime
CAGTCGACATGCGTTTCTGTCTACTGTTCCTTTTGGCCATGAGCTGCTGT
CTGCTGCAATTCTCCGTGGCTGGAGTGAATTTGGTGCGCGGACTGGAGGC
TGCCGGTCATCATCGCAACTTCACCGGCTCACCACCACCGCGTGGTGCTC
CTCCACCACCTCGGACCACCACCGCCAGTTCTTCGGGTGCAAGCTTTCTA
GACCAT

FMO07955.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG32726-RB 317 CG32726-RB 18..197 9..188 900 100 Plus
CG32726-RA 458 CG32726-RA 18..197 9..188 900 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7425481..7425613 188..56 665 100 Minus
X 23542271 X 7425679..7425726 56..9 240 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:52:44 has no hits.

FMO07955.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:12 Download gff for FMO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32726-RA 11..200 1..192 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:54 Download gff for FMO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32726-RA 11..200 1..192 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:46 Download gff for FMO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32726-RA 11..200 1..192 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:46 Download gff for FMO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7425477..7425612 57..192 98 <- Minus
X 7425679..7425733 1..56 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:54 Download gff for FMO07955.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7319510..7319645 57..192 98 <- Minus
arm_X 7319712..7319766 1..56 94   Minus