FMO07961.5prime Sequence
1009 bp (340 high quality bases) assembled on 2009-09-01
> FMO07961.5prime
CAATCCACATGGCGGCTAACAAACTGGATGCCATAATCTTCGGTGCCTCC
GGGTTTACCGGAAAGTACACCGTCTTCGAGGCTGTCAGCGTGCTGAAGGG
GCTGCAATGGGGCATCGCCGGACGCAACCAGGAGAAGCTGCAGTCGGTGC
TGCGGGAGATGGGTGCAAAGTCCAAGACAGACCTCTCCCAAACGCCGATC
GTCATCGCGGACGTGAACAACGAGGCGTCACTGCAAGAGATGGCCAAACG
CTGCCGCATTTTAGTCAATACGGACGGACCATATCGGTTCTTCGGCGAGC
GAGTGGTCAGGGCTTGCATCGAGGCGGGAACGCATCACGTAGACGTAAGC
GGAGAGCCACAGTACATGGAAACCATGCAGCTGCGCTACCATGATCTCGC
CAAGGAGCGTGGCGTGTACGTGATCAGTGCGTGCGGCTTTGATTCCATTC
CCGCCGACATGGGAGTCACCTTCGTGGAGAAGAACTTCGACGGCGTGGTC
AACTCAGTGGAGAACTTTGTCCATCTGGGCATCAAGGGAGGTACCAAGGG
AACGGGCAGTGCTGCACTCAACACCGGCACCTGGGAGAGCGCCATTCACG
CTATCGCCAACCGGAGCGAGTCCGTGGCCATCCGGCGCAAGTTGTTTCCC
GAGCGTCTGCCCAACTTTCATCCGGCTCTTAAGGCACGATCGCCGCTTTC
CCGTGCCGCGGAAGTGGACAACAAGGTGATCCTGCCGTTCCCTGAAACAG
ATCGCTCGGTGGTGATGCGCTCGCAGCGTTTCCTTTACGAACTGAAGAAG
AAGCGACCCGTTCAGATGCAAGGCCTACATGACGTATCCCTCATGGTTTG
CGGCCAGCGTATCGTGCTCTTCCCTCTATCATTGGCATTATGGTCAAGTC
TCCTTGGGCCGTCAGCTGCTGCATAAGTACCCAACGATCTTCTCGGAGGC
CATGACTTCACGCGAGGATTCGAGTGAGCGCGATGGACCGCTCCTCGTCA
GATGACATG
FMO07961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5167-RA | 1576 | CG5167-RA | 193..1183 | 9..995 | 4420 | 96.9 | Plus |
| CG2604-RB | 1636 | CG2604-RB | 151..645 | 23..517 | 780 | 77.7 | Plus |
| CG2604-RC | 1631 | CG2604-RC | 146..640 | 23..517 | 780 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12406724..12407695 | 9..978 | 4290 | 97 | Plus |
| 3R | 32079331 | 3R | 5222623..5223117 | 517..23 | 780 | 77.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:03 has no hits.
FMO07961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:08 Download gff for
FMO07961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5167-RA | 193..1137 | 9..950 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:46 Download gff for
FMO07961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5167-RA | 193..1137 | 9..950 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:58 Download gff for
FMO07961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5167-RA | 193..1137 | 9..950 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:58 Download gff for
FMO07961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12406724..12407668 | 9..950 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:46 Download gff for
FMO07961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8232446..8233390 | 9..950 | 97 | | Plus |
