FMO07967.5prime Sequence
1145 bp (1015 high quality bases) assembled on 2009-09-01
> FMO07967.5prime
CAGTCGACATGGCCCGCCGAACACAATCGCGTTATATCTTTGACATCGAG
GATAACTTCCGTGTGTTTCGCCACCAGTTTTTCGTCAACGGTGCAAGGAG
AGCGGATTGCACAACCTGTGAAAGTCGAGTGCCAGTCAGCGAACCATACC
ATCATCATTGGCGAAATGATATCGAGAACAATAGAAGCCATTGCATTCAA
ATTGGTTCTGATGAAAAGGATATCCTGAAGAGGATCGAGGACCAGGCCAT
CGAAGAGTTTATCTTGTGTGATGGAAGCATTGCGGCCAGGACCAACGACT
TTCTTCTGGATGCTGGGATGGATGCAGTTCCGCAACTGCTGCGATTTTTA
AGTTTTGGTACAGAAAAATTGGAGACCACAGTTGGATTTTACGTGGATGT
GAAAAAGGAGCGAATGTACTACGAAAGCAGTCCGTTAAATATCGAAAACC
ATTTCGATATTGGTGAGGCGGTGGACATGATATTCTCCATGCTGCTGGAG
AAGATCAGCAACTACGTGCTGCTCCATCAGAAGGTTCCACTGGAGGCGTG
TGTCATCAGAAGGATGAAGGTGACGGTCAAGAGATTTTGCGTCTCGCCTA
AGAGCAATTCTCTTAAACTTCCTTTGCAGTACCGAGTAAAAAACGCAACA
GAAGTCATTGGAAATGGAAGTAATAAGCATTCCTCCGATTTAGCACAACT
TTCTGAAACTTATATAAACCAAAAGGACCAAAATCAACACATTCCGGCAA
CTCTAAAAATAAACCTGTACACTTTTCGGGTCTGCAGCACTTCCAAGGAA
TTATTTGCAGTACCATATTTGCTCCGAGGCGATGATGTCGAAAACACACC
CACCTTCATCATTCAAACGGACGTAGTTGGTGACTTTCGGGGCTTACTTG
AGATCCGAAACATAAGAAAGTTCCTGCGCGTGATACCCACGATCGAGTGT
TCGAGTGCCGCCAGTGTCAATCCCACTTGTGGACCGGGTGCACCTGGCGC
TCCACAAACAAATCGCTGGTGCAGGAACTTTATGGTGGGGCACATGACAA
GACCGCCATCGAGTTGCAACGAGAATTGCCTGCCTTCTGCAAGGAATACT
TCAAATATGAATGGTCGGATTGCAGCAGCGAATTGCTAGCTTCAG
FMO07967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6885-RA | 1212 | CG6885-RA | 21..1140 | 8..1122 | 5305 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18744508..18745618 | 8..1114 | 5110 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:32 has no hits.
FMO07967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:05 Download gff for
FMO07967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 11..1149 | 1..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:04 Download gff for
FMO07967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 17..1155 | 1..1134 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:57 Download gff for
FMO07967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6885-RA | 17..1155 | 1..1134 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:57 Download gff for
FMO07967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18744504..18745642 | 1..1134 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:04 Download gff for
FMO07967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18737604..18738742 | 1..1134 | 98 | | Plus |
