FMO07968.5prime Sequence
981 bp (981 high quality bases) assembled on 2009-09-01
> FMO07968.5prime
CAGTCGACATGGACGACCAGGCGTGCCCGCGGTGCAAGACCACCAAATAC
CGGAATCCATCGCTCAAGCTGATGGTCAACGTTTGCGGACACACATTATG
CGAATCTTGCGTGGACTTGCTGTTCCTCAAAGGATCCGGCGCCTGTCCAG
AGTGCATGGTCCCATTGCGGCGCAACAACTTCCGCGTGCAGCTTTTTGAG
GACCCAATGGTGGAGAAGGAGGTGGATATTCGTAGGCGAATTCTGCGCGA
CTACAATAAACGTGAGGAGGACTTTGCCTCCCTGGCGGAGTACAATGACT
ATCTGGAGGAGATCGAGGACATTGTGTACAATCTGTGCAACAACATCGAC
ATCATCGAGACAAACAAGCGTATTGAGGCCTACAAGCGTGATAACCGTGA
GGTCATTCAGCGGAATAAAACCCGCGTGGGACGCGATGAGTACGCGTTGG
AGGAGATGCTGGAGCTGGAGAAAGTTCAGGAGGAGGCGCGTAGGAAGGAG
CTGGAGGAACTGGAGAACGAGCACAAGAAGAAGAAGGCCCGCGACAAGCA
GGCGCTGATCGAGGAGCTGATGTACAGCGGCAAGGATGCCGCCCAAATTG
TCACCGAGTTCGCCGAAAAAGCGGAAAAGCAGCGCGAGGAGGAGAAACAG
CTTCCACCGCCGAAGCCCGCCAACGAGTTCTCTACGGGCATAAAGTTCGG
ACAGACAGCTGATCCCAGTCTGCTGCCCGTTCCCAAATCGGAGGAGGGTC
CACTTTTCGTATACGAGCCACTTGTTCCTTTCAGTGAGGGACCTGCCATG
CCGCCCACAAATGAGATCGTGTCCAGGGGCTATATTGCCCACATACGAGC
TGAAACACCGCAGAGACGCCGGCGGATTCACATCCGCTCTGGCTTGTGAA
CGGGCGCTTCAGAGCGCTGCAGGGACTCTACTATACGGCTACACGGGTGT
GGTATCTGGCACCGCAAGCTTTCTAGACCAT
FMO07968.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mat1-RA | 1213 | CG7614-RA | 110..1069 | 9..963 | 4675 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10738761..10739720 | 963..9 | 4575 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:00 has no hits.
FMO07968.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:04 Download gff for
FMO07968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 111..1084 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:22 Download gff for
FMO07968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 106..1079 | 1..975 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:09 Download gff for
FMO07968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mat1-RA | 106..1079 | 1..975 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:09 Download gff for
FMO07968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10738751..10739724 | 1..975 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:22 Download gff for
FMO07968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6626256..6627229 | 1..975 | 98 | | Minus |
