FMO07970.5prime Sequence
1024 bp (1014 high quality bases) assembled on 2009-09-01
> FMO07970.5prime
CAGTCGACATGGAGCAGTTTCTTAAAGGTCTGCCCAAAGTAGAGCTCCAT
GCTCACCTCAACGGTTCCTTGGGCATCAAAAGCCTATGTGATCTTGGCGA
GCGATTGTATGGAACCTCTTGTAAAGATTTCCTGAAGTTGTGCGCGCACT
TCAGCCGATTTGAAAAGGATATGGATGCATGCTTCGAGAAGTTTGCATTT
GTGCACGAGTTGACCTCCACCCGGGAGGGTCTGCGATTTGCCACGGAGTT
GGCGATTCGAGATTTCGCTGAGGACAACGTCCAGTATGTGGAAATGAGGA
CCACTCCTAAGGCAAACGAGAACTATTCACGCAGGGACTACCTGCAGATC
GTGATCGATGCAATTAAGGCAGCTAGCGAAACGTATCCAGAGATAACAGT
CAAGCTACTGCCCTCCATCAATCGAGCGGAACCAGTGGACGTGGCTGAGG
AAACAGTTTCCCTGGCTGTGGAGTTGGCACGGGCTCATCCAAATCTTATC
TTAGGCATCGATCTTAGCGGTAATCCAGGGAAGGGGCGGTTTTCCGACTT
TGCTCCTATTCTTGCACAGGCCCGGGATAAGGGTCTGAAGTTAGCTATAC
ACTGCGCCGAGATCGAGAATCCATCGGAGGTAAAGGAAATGCTGCACTTT
GGAATGTCCCGCTGTGGACATGGAACTTTTCTTACTCCCGAGGACATTGG
GCAGCTTAAACAACGAAATATTGCCATTGAATGCTGCCTCACTAGTAATG
TTAAGTCGGGAACAGTGCCCAGCTTGGAGGAGCACCACTTGAAAAGAATC
ATGGAGGCAGATGCACCCAAGTTATCTGCACGGACGACAGTGGCGTTTTT
GATACCACTTTGACAAAGGAGTTTCTGATTGCTGCGGAACTTTCGGTCTA
CCCGTGAACAATGCATCGATTTGACATGGAGCAGTGCATCATTCATTCGC
AGCGAACAGAGCAATAAAGATGCTGATAGGGTGGGAACTACGCAGACTAT
TGGTCAAGCAGCTTTCTAGACCAT
FMO07970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ada-RA | 1121 | CG11994-RA | 57..1066 | 9..1007 | 4730 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9065239..9066185 | 9..950 | 4475 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:50:04 has no hits.
FMO07970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:10 Download gff for
FMO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada-RA | 61..1074 | 9..1011 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:15:27 Download gff for
FMO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada-RA | 57..1066 | 9..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:22 Download gff for
FMO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ada-RA | 57..1066 | 9..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:22 Download gff for
FMO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9065239..9066248 | 9..1007 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:15:27 Download gff for
FMO07970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4890961..4891970 | 9..1007 | 98 | | Plus |
