FMO07975.5prime Sequence
880 bp (880 high quality bases) assembled on 2009-09-01
> FMO07975.5prime
CAGTCGACATGGACAACAGCATCGTCGAGGAGAACGGCAACTCGTCGGCG
GCATCGGGCTCCAATGACGTGGTCGATGTCGTTGCCCAACAGGCGGCGGC
AGCGGTGGGCGGCGGCGGTGGAGGAGGAGGAGGCGGCGGCGGTGGTAACC
CCCAGCAGCAGCAACAGAACCCACAAAGTACAACGGCCGGCGGTCCAACG
GGTGCGACGAACAACGCCCAGGGAGGCGGAGTGTCCTCCGTGCTGACCAC
CACCGCCAACTGCAACATACAATACCCCATCCAGACGCTGGCGCAGCACG
GACTGCAGGTGCAGTCCGTGATACAGGCCAATCCCTCGGGAGTCATACAG
ACAGCAGCTGGAACCCAGCAGCAGCAACAGGCGCTGGCCGCCGCCACAGC
GATGCAGAAGGTGGTCTACGTGGCCAAGCCGCCGAACTCGACGGTCATCC
ACACGACGCCTGGCAATGCAGTGCAAGTGCGTAACAAAATCCCTCCAACC
TTTCCGTGTAAGATCAAGCCCGAACCGAACACGCAGCACCCGGAGGACAG
CGACGAGAGTCTGTCGGACGACGATTCCCAGCACCACCGCAGCGAGCTGA
CGCGACGGCCGTCGTACAATAAGATCTTCACCGAGATCAGCGGTCCGGAC
ATGAGCGACAACAGCGGGATAGCGGAGGATCAGACCCGTAAGCGCGAGAT
CCGGCTGCAGAAGAACAGGGAGGCGGCGCGTGAGTGCCGGCGCAAGAAGA
AGAGTACATCAAGTGCCTGGAGAATCGAGTGGCGGTGCTAGAGAACCAAA
ACAAAGCGCTCATCGAGGAGCTGAAGTCGCTCAAGGAGCTCTACTGTCAG
ACCAAGAACGATGCAAGCTTTCTAGACCAT
FMO07975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CrebB-RF | 2072 | CG6103-RF | 447..1303 | 7..862 | 4260 | 99.9 | Plus |
| CrebB-RP | 2091 | CG1-RP | 478..1322 | 7..862 | 4070 | 98.5 | Plus |
| CrebB-RO | 2049 | CG6103-RO | 436..1280 | 7..862 | 4070 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18372131..18372435 | 7..311 | 1525 | 100 | Plus |
| X | 23542271 | X | 18375842..18376048 | 657..862 | 985 | 99.5 | Plus |
| X | 23542271 | X | 18373030..18373213 | 305..488 | 920 | 100 | Plus |
| X | 23542271 | X | 18373287..18373455 | 489..657 | 845 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:19 has no hits.
FMO07975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:59 Download gff for
FMO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-17A-RH | 9..873 | 1..865 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:27 Download gff for
FMO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 300..1165 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:18 Download gff for
FMO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CrebB-RF | 442..1307 | 1..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:18 Download gff for
FMO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18375843..18376052 | 658..866 | 98 | | Plus |
| X | 18372126..18372432 | 1..308 | 99 | -> | Plus |
| X | 18373034..18373213 | 309..488 | 100 | -> | Plus |
| X | 18373287..18373455 | 489..657 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:27 Download gff for
FMO07975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18267067..18267246 | 309..488 | 100 | -> | Plus |
| arm_X | 18267320..18267488 | 489..657 | 100 | -> | Plus |
| arm_X | 18266159..18266465 | 1..308 | 99 | -> | Plus |
| arm_X | 18269876..18270085 | 658..866 | 98 | | Plus |
