FMO07979.5prime Sequence
752 bp (752 high quality bases) assembled on 2009-09-01
> FMO07979.5prime
CAGTCGACATGCCACGCAAGAAGCGCAGTTCCAGCCCCACGGAGTTCTTT
GATGACGACTTCGATGAGGATGCCAGTTCTCAAAGCTCCCAACCGCCGGT
GCAGCGAAATGCGGCAAATGCCCGGGAGCGGATGCGTATGCGGGTTTTAT
CCAGCGCCTACGGACGTTTGAAGACCAAGCTGCCCAACATTCCGCCGGAC
ACGAAGCTCTCCAAGTTGGACACGTTGCGTTTGGCCACGCTCTACATCAA
GCAGCTAATTACGGCTGTGGAGACAGGCAGCCACTCGCAAAACCACCCGC
ACAACCACAACCAGCACCACAGCCTCAACCACAGTCACTCGAGTACCACC
AGTTCCGAAGGCCTGGACACAAGTCACATGGCAGATTCGTCCGGTGGAGG
CAATTATAATTTCCACAACAACGGACACGGCATGAGCTGGCCCTTTGAGT
TCCACCAGAGTAGCCGGAGTTTGGCATTTGCCCCATCATCATCAACCACC
TCATCCGCCCGTATGGATTGGCAAACCCTGCATACACAATCTTATCCGAA
GACTACGCGAGGCGAAACCCATGTTTCGGCGGATCTAAGTTACCATCAGT
TGCCGGAATCTCACAGTCACTGGTATCCGGCGGAAGTGCATCAAATGGAG
CCAGCGGCCAGCTGTTCCTATGACTCTGGAATGGGGCAGCATCAGCGGGG
CATAGCTATAGCCACTAGCCATGCCCATGGCATTGCAAGCTTTCTAGACC
AT
FMO07979.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HLH54F-RA | 1078 | CG5005-RA | 171..896 | 9..734 | 3600 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17758087..17758436 | 85..434 | 1735 | 99.7 | Plus |
| 2R | 25286936 | 2R | 17760035..17760335 | 434..734 | 1490 | 99.7 | Plus |
| 2R | 25286936 | 2R | 17757575..17757651 | 9..85 | 385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:03:22 has no hits.
FMO07979.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:56 Download gff for
FMO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH54F-RA | 159..889 | 9..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:20 Download gff for
FMO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH54F-RA | 171..901 | 9..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:27 Download gff for
FMO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH54F-RA | 171..901 | 9..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:27 Download gff for
FMO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17757575..17757650 | 9..84 | 100 | -> | Plus |
| 2R | 17758087..17758436 | 85..434 | 99 | -> | Plus |
| 2R | 17760036..17760340 | 435..740 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:20 Download gff for
FMO07979.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13645080..13645155 | 9..84 | 100 | -> | Plus |
| arm_2R | 13645592..13645941 | 85..434 | 99 | -> | Plus |
| arm_2R | 13647541..13647845 | 435..740 | 99 | | Plus |
