FMO07983.5prime Sequence
857 bp (857 high quality bases) assembled on 2009-09-01
> FMO07983.5prime
CAGTCGACATGTCGAAGTTGAGCGACACTAAGATCCCGATCACGGAGTTC
CTGGAGGCATACCGTCGCCAGCCGTGCCTCTACAACACACTGCTGGACTC
GTACAAGAATCGTGTGTCCCGGGAGGAGGCCTACGGAGCGATCATCCGGT
CCCTGAAGATACCCCAACTGACAGTGTCGGACATAAAGCTAAAGATCAAG
AGCGTGCGTACCGTGTACTCTAAGGAGCTGCGCATCTGGATGCGTGAGAA
GGAGCTGGGCAGGACCTACGAACCAAAGTTGTTTTGGTTTAGGTTGGCCG
ACTCCTTTCTACGCTCCGTTTCCCTCTCCCACTGCAAAAGGCAGGGAAAA
AATAACAGTTCCAGTGCTCAATTAACGACGATCAAATCGGATGAGACGAG
CAAGCTTCTTTGCACTGCCGCCGCAGATATCACTATGAGCGAGGATGCGC
TAGAGGAAGAGGATGCAGAGGTAAATGGCGAGCCGGAGGAGTGTCCTTTG
GAGGAAAGCAGGCCAACAGCAAGCATCTGCAAAGATGATTCCACGCTCTG
CCTGGCGGATCAACCACAGCAGGAGCACTATTCTCAGGGGTGCAGCAGCT
CCCAGCAGCTTCCTCACACGATGGCACAACGAAAATCAAAGTACATTACA
AGTCTGGACTCGGCCGGAGAGGATGATCTTATTATATTCGGCCAGAGCAT
CGCCTCTCAGCTGCGAACCATTCCGGATTCATATTCTCGGTCCGTGGCTA
AGCTGCGTATCCAGCAGGTGCTGTTCGAGGCTGAACCGGGCAGTTTCAGA
GCACCGAGGTCAATAGCACGCAACCTCCAGAATACCTTTGCAAGCTTTCT
AGACCAT
FMO07983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15601-RA | 1078 | CG15601-RA | 67..898 | 8..839 | 4115 | 99.8 | Plus |
| CG15601-RB | 1485 | CG15601-RB | 477..1305 | 8..839 | 4060 | 99.4 | Plus |
| CG15601-RC | 940 | CG15601-RC | 256..760 | 335..839 | 2450 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15711508..15712006 | 341..839 | 2400 | 99.6 | Plus |
| X | 23542271 | X | 15711123..15711456 | 8..341 | 1670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 138..196 | 333..396 | 109 | 70.3 | Plus |
FMO07983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:02 Download gff for
FMO07983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 1..834 | 9..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:56 Download gff for
FMO07983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 60..901 | 1..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:51 Download gff for
FMO07983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15601-RA | 60..901 | 1..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:51 Download gff for
FMO07983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15711116..15711456 | 1..341 | 98 | -> | Plus |
| X | 15711509..15712009 | 342..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:56 Download gff for
FMO07983.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15605149..15605489 | 1..341 | 98 | -> | Plus |
| arm_X | 15605542..15606042 | 342..843 | 99 | | Plus |
