FMO07984.5prime Sequence
828 bp (828 high quality bases) assembled on 2009-09-01
> FMO07984.5prime
CAGTCGACATGTCGCTTGCACGTTTCCTATTTTATATTCTCGTGTTCAGT
TCACTCTACTGTGACTTATTGGCATTGGAGCACTTCATTGTGGGTGGCCA
GAATGCAGCTGAAGGAGATGCCCCCTACCAGGTGTCGCTCCAAACTCTTT
TGGGTAGTCACCTATGCGGTGGTGCCATCATATCGGACCGATGGATAATT
ACGGCTGGTCACTGTGTCAAAGGATACCCGACTAGCAGACTTCAAGTGGC
CACTGGTACAATTCGCTATGCGGAACCAGGAGCTGTTTATTACCCAGACG
CCATCTACCTGCACTGCAACTATGACAGTCCCAAGTACCAGAATGATATT
GGCCTGCTCCACCTGAACGAGAGCATTACCTTTAACGCACTAACTCAGGC
GGTTGAACTACCCACATCCCCTTTTCCAAGAGGAGCTTCGGAGCTGGTTT
TCACCGGATGGGGATCTCAGTCAGCGGCGGGGTCGTTGCCATCGCAGTTG
CAGCGTGTCCAGCAGCAACACCTCAACTCCCCGGCTTGCGAGTCCATGAT
GTCTGCCTACGAGGATCTGGAACTGGGACCTTGCCATATTTGTGCTTATC
GTCAGGCAAATATTGGAGCCTGCCACGGAGATTCTGGAGGTCCTCTAGTT
CACCAGGGCACCCTGGTGGGCATACTCAACTTCTTTGTACCCTGCGCCCA
GGGTGTGCCTGATATATTCATGAATATAATGTACTACCGCGACTGGATGC
GACAAACGATGAGTGGCAATGGCAAATGTGCACAGGTCAACCAGCAAGAC
AATAGATGGAGCAAGCTTTCTAGACCAT
FMO07984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17477-RA | 851 | CG17477-RA | 8..809 | 8..810 | 3990 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17126130..17126931 | 810..8 | 3965 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:25:53 has no hits.
FMO07984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:21:02 Download gff for
FMO07984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:53 Download gff for
FMO07984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..814 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:45 Download gff for
FMO07984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17477-RA | 4..812 | 1..814 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:45 Download gff for
FMO07984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17126126..17126935 | 1..814 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:53 Download gff for
FMO07984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12951848..12952657 | 1..814 | 99 | | Minus |
