FMO07988.5prime Sequence
867 bp (867 high quality bases) assembled on 2009-09-01
> FMO07988.5prime
CAGTCGACATGAAATACACCGCCCTTTGGCGCTCGGTGGGCGCCATGAGC
TGCGGATCCCTGGTCACCTACTTTGCCATCCGGCTGTTCGATGGCCTGGA
ACCCTCCATGTTATCAGGTGGAGCACAAGGGGGTAAGGGGCGGGCGATTG
AACCTTTGGCCAGTGGCGCCTGGCGGCACCATTGGGACTTGGACAAGCCG
CAGCTGCAAAAGGTGGCAAATGGCGAGGAGTCCTCCGCCCTGCGACACAT
TATCCTGGTGAGACATGGCGAGTACACGAGGACCCCGAATGGAAGCCACC
TCACGGAACTGGGCCGTCGGCAGGCGGAACGGACGGGGCAAAGGTTGCGG
GAAATGGGCTTGTCCTGGGACCACGTGGTGGCCTCTACAATGCCGCGTGC
CGAGGAGACGGCCATGATCATCCTGAAGCAGCTGAACCTCGATCCCCTGA
AGATGAAGCGCTGCACTTTGCTGCCGGAGGGCACTCCGTACCCAGGAGAT
CCCCCCTCCAAGAGGAGTGCCCGCAGCCTGGACCTGGCCTATCAGAGGGA
TGGTCCGCGGATCGAGGCCGCCTTTAGGCGCTACTTCTTCAGGGCCAGTC
CGGAGCAGGAGCACGACTCGTACCTGCTCATCGTGGGCCACTCGAATGTG
ATCCGTTACCTGATTCTGCGGGCCCTGCAGCTTCCTCCGGCCGCCTGGAC
GCGCCTCAACCTGAACCACGGCTCCATCACCTGGCTGACTGTGTGGCCGT
CTGGCTACGTTACCTTGCGCTGCTTGGGGGACTCCGGCTTCATGCCGGTG
ACCGAGATCACCCATCGAAGGCCGTCACCGGCGAAATCCCGGCAGTAACG
CAAGCTTTCTAGACCAT
FMO07988.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pgam5-2-RA | 1390 | CG15874-RA | 37..877 | 8..849 | 4185 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24431866..24432697 | 839..8 | 4160 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:33 has no hits.
FMO07988.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:50 Download gff for
FMO07988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15874-RA | 1..843 | 9..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:35 Download gff for
FMO07988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-2-RA | 28..882 | 1..856 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:50 Download gff for
FMO07988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pgam5-2-RA | 28..882 | 1..856 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:50 Download gff for
FMO07988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24431862..24432704 | 1..845 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:35 Download gff for
FMO07988.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20319385..20320227 | 1..845 | 99 | | Minus |
