FMO07989.5prime Sequence
797 bp (797 high quality bases) assembled on 2009-09-01
> FMO07989.5prime
CAGTCGACATGTTCGCTCCGATAGATCCTGTAAAGATACCCGTTGTAAGC
AATCCATGGATAACCATGGGCACATTGATTGGCTATCTGCTGTTTGTGCT
CAAGCTGGGCCCCAAAATCATGGAGCACCGAAAGCCCTTCCATTTGAATG
GCGTCATCAGGATCTACAACATATTCCAGATCCTTTACAATGGTCTAATA
CTCGTTTTAGGAGTTCACTTCCTGTTTGTCCTGAAAGCCTACCAAATCAG
TTGCATTGTTAGCCTGCCGATGGATCACAAATATAAGGATAGAGAGCGTT
TGATTTGCACTTTGTACCTGGTGAACAAATTCGTAGACCTTGTGGAAACC
ATTTTCTTTGTGCTCCGCAAAAAGGACAGACAGATATCCTTCCTGCACGT
CTTCCATCATTTTGCGATGGCATTTTTTGGATATCTCTACTACTGCTTCC
ACGGATACGGTGGCGTTGCCTTTCCACAGTGCCTGCTAAACACCGCCGTC
CACGTGATTATGTACGCCTACTACTATCTATCCTCGATCAGCAAGGAGGT
GCAGAGAAGTCTCTGGTGGAAGAAATACATCACAATTGCTCAGCTGGTCC
AGTTCGCCATTATTCTGCTCCACTGTACCATCACGCTGGCACAGCCCAAC
TGCGCGGTCAACAGACCCTTGACCTACGGATGCGGATCGCTTTCAGCGTT
TTTTGCAGTGATATTTAGCCAATTTTATTACCACAACTACATAAAGTCAG
GAAAGAAGTCAGCGAAACAAAACAAAAATGCAAGCTTTCTAGACCAT
FMO07989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eloF-RA | 933 | CG16905-RA | 17..792 | 4..779 | 3850 | 99.7 | Plus |
| CG8534-RA | 990 | CG8534-RA | 428..676 | 354..605 | 385 | 77.6 | Plus |
| CG5278-RA | 1722 | CG5278-RA | 545..611 | 343..409 | 185 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9814448..9815017 | 210..779 | 2835 | 99.8 | Plus |
| 3R | 32079331 | 3R | 9814177..9814383 | 4..210 | 1020 | 99.5 | Plus |
| 3R | 32079331 | 3R | 9813377..9813625 | 354..605 | 355 | 77 | Plus |
| 3R | 32079331 | 3R | 22559794..22559860 | 409..343 | 185 | 85.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:18:14 has no hits.
FMO07989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:49 Download gff for
FMO07989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eloF-RA | 14..797 | 1..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:25 Download gff for
FMO07989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eloF-RA | 14..797 | 1..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:39 Download gff for
FMO07989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eloF-RA | 14..797 | 1..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:39 Download gff for
FMO07989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9814174..9814382 | 1..209 | 98 | -> | Plus |
| 3R | 9814448..9815022 | 210..786 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:25 Download gff for
FMO07989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5639896..5640104 | 1..209 | 98 | -> | Plus |
| arm_3R | 5640170..5640744 | 210..786 | 99 | | Plus |
