FMO07992.5prime Sequence
845 bp (845 high quality bases) assembled on 2009-09-01
> FMO07992.5prime
CAGTCGACATGTTGCTCATTTTGTTACCACTTGTTCTGTTCACTTCGAGT
GCCGCAAGTCAGATCCTATATCCGCCGCAGTATACCAAGAATCGCATTGT
GGGCGGGGAGGAGGCTGCCGCAGGTCTGGCACCTTATCAGATATCCCTTC
AAGGAATCGGCAGTGGAGCTCATTCCTGTGGCGGTGCTATCATCGATGAA
CGGTGGATTATAACGGCGGCTCACTGTACAAGAGGCAGACAGGCGACGGC
ATTTCGGGTCCTAACAGGCACACAGGATCTGCATCAAAATGGATCCAAGT
ATTACTATCCCGACAGGATTGTGGAGCATAGTAACTATGCACCACGCAAG
TATCGCAACGATATAGCTTTACTGCATCTGAATGAATCGATTGTGTTTGA
TAATGCCACTCAACCGGTGGAACTGGATCACGAGGCCTTGGTTCCAGGAT
CCCGACTCCTTTTAACCGGTTGGGGAACCCTCTCCTTGGGCGGAGATGTT
CCCGCCCGTCTGCAGAGTCTGGAGGTCAACTATGTGCCCTTCGAGCAGTG
TCGAGCTGCCCACGACAATAGCACTCGGGTGGACATTGGCCACGTTTGCA
CCTTCAATGACAAGGGACGCGGAGCGTGTCATGGAGATTCCGGTGGTCCT
CTGGTGCACAATGGCAAGCTGGTGGCTCTGGTCAACTGGGGACTGCCATG
TGCTAAAGGATATCCAGATGCTCACGCTTCAATTTCATATTATCACGACT
TTATACGCACTCACCTAAGTCTATCCAAAACGGACAGCTCTGAGGATATC
GAGGAGGAAATGATTGCTCTCCAGGATGCAAGCTTTCTAGACCAT
FMO07992.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5255-RA | 914 | CG5255-RA | 12..837 | 2..827 | 4100 | 99.8 | Plus |
| CG31269-RB | 937 | CG31269-RB | 645..707 | 630..692 | 180 | 87.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17137904..17138619 | 2..717 | 3550 | 99.7 | Plus |
| 3R | 32079331 | 3R | 17138676..17138788 | 715..827 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:28:50 has no hits.
FMO07992.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:46 Download gff for
FMO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5255-RA | 3..821 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:46 Download gff for
FMO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5255-RA | 11..837 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:05 Download gff for
FMO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5255-RA | 11..837 | 1..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:05 Download gff for
FMO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17137903..17138619 | 1..717 | 99 | -> | Plus |
| 3R | 17138679..17138788 | 718..827 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:46 Download gff for
FMO07992.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12963625..12964341 | 1..717 | 99 | -> | Plus |
| arm_3R | 12964401..12964510 | 718..827 | 100 | | Plus |
