FMO07993.5prime Sequence
865 bp (865 high quality bases) assembled on 2009-09-01
> FMO07993.5prime
CAGTCGACATGCTGAAGCGCAAACTGAACCAGCAAAAATGCAATCTGGAG
ATTGGGGAGCCCACTAAGACATCCGCAAGGCAGGGCAGTACATCGGAATT
CTTTGATAAGCCGCTGTGGCTTAAATTCTACGAAACCGAAGTCAAGTTAA
ATGAGGCGCTGGAAAAACTGAATCCTCCTGAGAGCACACCGTTCATCTAC
AACCCGATAGTATATGCATCCCAGCTGCACTGCGACTATTTACGTCGCTA
TATGGACGGTCCCAAGAAGCTGGTATTTGTTGGCATGAATCCAGGGCCCA
ATGGAATGGCCCAAACCGGAATTCCCTTTGGCAATGTGCGCACAGTAAAG
TTGTTAATGCAGCTGGCTGGTTCGGTGGACCAACCTCCAGTCGTGCATCC
CAAACGTCCAGTCGCTGGCTTGGATTGTCGGATTGAGGAGCCCAGTGGTG
TGCGTTTGTGGGAGCTGTTCCTCCGACTGGCTGGCAGCATGCAGACCTTC
TCCCAGCAGTGTTTCGTCCACAATTTCTGTCCGCTAGCTTTCTTTGGCGC
AGATGGCAGGAACATAACGCCCAGTGAAATCAGAGGAGCTTACAAAAATC
AGCTAGGAGACCTGTGCCTGCACACCCTGGAGGAACAACTGAAGCTCCTC
CAACCCGACGTGATTGTGGCCGTTGGGGAGTATGTTCACAGCGCACTGAA
GCGTTCAGATATGCCAAATCCAATTGCGTTTCGGTGCTCCGACTGCCGCA
TCCTAGTCCGCGTTCTACTAATAATACCAATTGGCCCGAGAAGGCTCAAG
CATTTTTGGAGGAGCACAACCTAATCCGATTCATGCGGAATGAGGCTGCA
AGCTTTCTAGACCAT
FMO07993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5285-RA | 983 | CG5285-RA | 70..909 | 9..847 | 4175 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17151029..17151556 | 321..847 | 2590 | 99.8 | Plus |
| 3R | 32079331 | 3R | 17150656..17150967 | 9..320 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:56 has no hits.
FMO07993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:46 Download gff for
FMO07993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 1..843 | 9..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:04 Download gff for
FMO07993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 62..915 | 1..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:38 Download gff for
FMO07993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5285-RA | 62..915 | 1..853 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:38 Download gff for
FMO07993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17150648..17150967 | 1..320 | 98 | -> | Plus |
| 3R | 17151029..17151562 | 321..853 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:04 Download gff for
FMO07993.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12976370..12976689 | 1..320 | 98 | -> | Plus |
| arm_3R | 12976751..12977284 | 321..853 | 99 | | Plus |
