FMO07995.5prime Sequence
982 bp (982 high quality bases) assembled on 2009-09-01
> FMO07995.5prime
CAGTCGACATGAGTTCTTTGACTCATTCGATTTGGTTTTCTGCGATTGCG
ATGGCAAGTTTGTTTCATTTGTACCTACACTATATATGGTCATATGTGGG
TCTTGTACCGCCAGGTGTTGTTTGGTATCCACTGAGGGATTTCATACCCG
GTTCCGCCGAGGCATTGGCCCATTTGGCCCATCTTGGCAAGGATGTGACC
TTCGTGACCAACAACAGCATCAGTTCGGTGAAGGAGCACATCGAGAAGTT
TGAGAAACAGGGCCATCTAAAGATTGATGAGCATCAAATCGTTCATCCTG
CCCAAACCATCTGCGATCACTTGAGGTCCATTAAATTCGAGGGACTCATC
TACTGCCTGGCCACGTCGCCATTTAAGGAAATCCTCGTAAATGCCGGATT
TCGTTTGGCCCAAGAGAATGGTTCGGGAATCATCACGAGGCTGAAGGATC
TGCACGAGGCCATCTTCTCTGGCGAATCGGTGGATGCGGTCATCATCGAC
GTTGACTTCAACCTGTCGGCGGCCAAGTTGATGCGTGCCCATTTCCAGCT
ACAGAATCCGAAGTGCCTTTTCCTCGCCGGAGCTGCCGATGCTTTGATTC
CATTTGGCAAGGGTGAAATCATAGGACCTGGAGCCTTTATCGACGTGGTG
ACCCAGGCCGTTGGCCGTCAGCCCATAACCTTGGGCAAACCGGGCGAGGA
TCTGCGCAAGCTTCTACTGGAACGCCATCGGGAAATTCCGCCCAGCCGCG
TGCTCTTCGTGGGCGATAGCCTGGCCAGCGATATTGGATTCGCTCGCGCC
AGTGGCTACCAGACGCTCCTCGTCCTTACCGGCGGCACAAAGCTGGAGGA
TGTCCAGCGACTGCCGATTGACCATTCCCAGATGCCCGACTATCTGGCCG
ATTGCCTGGGCCAGATAGCAATCAATATATCCGGCATCGAGTAACTCTGA
CTCGCGCATTCGGTGCAAGCTTTCTAGACCAT
FMO07995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10352-RB | 1491 | CG10352-RB | 357..1211 | 114..965 | 4200 | 99.6 | Plus |
| CG10352-RB | 1491 | CG10352-RB | 313..358 | 9..54 | 230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11875586..11875931 | 965..623 | 1600 | 98.8 | Minus |
| X | 23542271 | X | 11876449..11876721 | 281..9 | 1365 | 100 | Minus |
| X | 23542271 | X | 11875991..11876201 | 625..415 | 1055 | 100 | Minus |
| X | 23542271 | X | 11876256..11876392 | 416..280 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:37 has no hits.
FMO07995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:53 Download gff for
FMO07995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10352-RA | 1..963 | 9..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:37 Download gff for
FMO07995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10352-RB | 357..1211 | 114..965 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:51 Download gff for
FMO07995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10352-RB | 357..1211 | 114..965 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:51 Download gff for
FMO07995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11875586..11875929 | 625..965 | 99 | <- | Minus |
| X | 11875992..11876199 | 417..624 | 100 | <- | Minus |
| X | 11876256..11876390 | 282..416 | 100 | <- | Minus |
| X | 11876449..11876725 | 1..281 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:37 Download gff for
FMO07995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11769619..11769962 | 625..965 | 99 | <- | Minus |
| arm_X | 11770025..11770232 | 417..624 | 100 | <- | Minus |
| arm_X | 11770289..11770423 | 282..416 | 100 | <- | Minus |
| arm_X | 11770482..11770758 | 1..281 | 98 | | Minus |
