Clone FMO08002 Report

Search the DGRC for FMO08002

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:80
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptAtox1-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08002.5prime Sequence

239 bp (239 high quality bases) assembled on 2009-09-01

> FMO08002.5prime
CAGTCGACATGACAGTGCACGAATTCAAGGTGGAGATGACCTGCGGCGGA
TGTGCCAGTGCCGTGGAGCGAGTCCTGGGCAAACTGGGCGATAAGGTCGA
GAAAGTCAACATTAACCTGGAGGATCGGACGGTGAGCGTGACGTCGAACC
TGTCGTCCGACGAGTTGATGGAGCAGCTGCGCAAGACCGGCAAGAGCACC
ACCTACGTCGGGGTGAAGAAAGCAAGCTTTCTAGACCAT

FMO08002.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
Atox1-RB 903 CG32446-RB 196..408 9..221 1065 100 Plus
Atox1-RA 903 CG32446-RA 196..408 9..221 1065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21641973..21642104 90..221 660 100 Plus
3L 28110227 3L 21641287..21641362 15..90 380 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:29:29 has no hits.

FMO08002.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:20:43 Download gff for FMO08002.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32446-RA 142..361 1..221 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:49 Download gff for FMO08002.5prime
Subject Subject Range Query Range Percent Splice Strand
Atox1-RA 189..408 1..221 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:15 Download gff for FMO08002.5prime
Subject Subject Range Query Range Percent Splice Strand
Atox1-RA 189..408 1..221 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:15 Download gff for FMO08002.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21641284..21641362 8..90 95 -> Plus
3L 21641974..21642104 91..221 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:49 Download gff for FMO08002.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21634384..21634462 8..90 95 -> Plus
arm_3L 21635074..21635204 91..221 100   Plus