FMO08007.5prime Sequence
995 bp (915 high quality bases) assembled on 2009-09-01
> FMO08007.5prime
CAGTCGACATGCAGACGATCCGTCGGTTGGAGACGGCCGCCGGTAATCTG
TACAAGGAGAAGATCATTCGCGGCTTCTGTCATCTGTATTCCGGCCAGGA
GGCATGCGCCGTTGGCATGAAGGCGGCGATGCGGGATGTGGACAACATCA
TCTCGGCGTACCGTGTCCACGGATGGACCTACCTGATGGGCGTCTCACCC
AGCGGCGTACTGGCTGAGCTCACCGGTGTCCAGGGTGGCTGTGCCCGCGG
CAAGGGTGGCTCCATGCACATGTACGCACCGAACTTCTACGGAGGCAATG
GCATCGTGGGTGCTCAAGTTCCTTTGGGTGCCGGCGTTGGCTTGGCCTGC
AAGTACAAGGGCAATGGCGGCATGTGCCTGGCCCTCTACGGTGATGGTGC
CGCCAATCAAGGACAGGTGTTCGAGGCTTACAACATGGCCTACCTGTGGA
AACTGCCTGTGATCTTTGTCTGCGAGAACAACAACTACGGAATGGGCACC
AGTTCTGAGCGTGCTTCCTGCAACACTGATTACTATACCCGCGGCGACGC
TCTGCCCGGAATCTGGGTGGACGGCATGGATGTGCTGGCCGTGCGCAGCG
CCACCGAGTTCGCCATCAACTATGTGAACACTCACGGACCTTTGGTGATG
GAGACGAACACGTACCGATACTCTGGACACTCCATGTCCGATCCGGGCAC
ATCGTACCGCACACGCGAGGAGATCCAGGAGGTGCGCCAGAAGCGTGATC
CCATCACCTCCTTCAAGGAGCTGTGCATCGAGCTGGGTCTGATTACCACC
GATGAAGTTAAAGGCCATCGATCTGATGTACGCAAGGAGGTCGACGAGGC
CACGCCTTCGCAAGTCGATGCCGAGCTGGGCGTGAGCCACTCTGGACGGA
CGTGTACTCACAATCTGAGCCTAGCTGCGCGTCACATCGCTACGATAATG
ATCACATCCAGAGCGCAGGCGTCAATCACGCAGCTTTCTAGATCA
FMO08007.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0334-RB | 1992 | CG7010-RB | 653..1636 | 9..979 | 4510 | 98.1 | Plus |
| l(1)G0334-RD | 1667 | CG7010-RD | 328..1311 | 9..979 | 4510 | 98.1 | Plus |
| l(1)G0334-RA | 1760 | CG7010-RA | 421..1404 | 9..979 | 4510 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4703639..4704120 | 9..490 | 2410 | 100 | Plus |
| X | 23542271 | X | 4704194..4704516 | 489..811 | 1615 | 100 | Plus |
| X | 23542271 | X | 4706459..4706790 | 379..710 | 265 | 72 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:10 has no hits.
FMO08007.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:53 Download gff for
FMO08007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0334-RD | 321..1315 | 1..983 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:37 Download gff for
FMO08007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0334-RA | 414..1408 | 1..983 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:16 Download gff for
FMO08007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0334-RA | 414..1408 | 1..983 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:16 Download gff for
FMO08007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4703632..4704119 | 1..489 | 99 | -> | Plus |
| X | 4704195..4704517 | 490..813 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:37 Download gff for
FMO08007.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4598228..4598550 | 490..813 | 99 | -> | Plus |
| arm_X | 4597665..4598152 | 1..489 | 99 | -> | Plus |
