Clone FMO08015 Report

Search the DGRC for FMO08015

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:80
Well:15
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12355-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08015.5prime Sequence

299 bp (299 high quality bases) assembled on 2009-09-01

> FMO08015.5prime
CAGTCGACATGTCCATCATGGAGGGCTCTGCGGATATTTTCCTGGAACTC
CGCGAAAAATTCGTGCCGACTTTTATGCGTTCCTGCATTTTCTGGTTGCC
CGCGCAGGCCTTGAACTTTTCCCTGGTTGCACCCCGATTCCGTGTCATCT
ATATGGGTATTTGTGGATTGATTTGGGTGAATATTCTATGTTGGACCAAG
CGGCAAAGTCTTCCAGTCGCAACGAAAGAAATTGCAACTGATTCAAATAA
TAATGCAGCTGCCATAAGGAATTCCGAAACAGCAAGCTTTCTAGACCAT

FMO08015.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG12355-RE 1026 CG12355-RE 661..934 8..281 1370 100 Plus
CG12355-RD 791 CG12355-RD 426..699 8..281 1370 100 Plus
CG12355-RB 817 CG12355-RB 452..725 8..281 1370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15493056..15493329 281..8 1370 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:57:37 has no hits.

FMO08015.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:49 Download gff for FMO08015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12355-RB 335..620 1..290 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:45 Download gff for FMO08015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12355-RB 448..733 1..290 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:03 Download gff for FMO08015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12355-RB 448..733 1..290 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:03 Download gff for FMO08015.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15493048..15493333 1..290 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:45 Download gff for FMO08015.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15486148..15486433 1..290 97   Minus