FMO08019.5prime Sequence
590 bp (590 high quality bases) assembled on 2009-09-01
> FMO08019.5prime
CAGTCGACATGAAAAGAGCGGCCGAAATGGACGAATTGACGTATCAGACA
GCTGTAAAAAAGGCCCAACTGGTTGAGAGGAATCCCCAGTTGCAGATAAA
CCCCATGCGTGTGTCCATGCACCAGGAGGAGGATATCATCGAATTGGCCC
AACAAATTCAGAATGCTGATAAACAATTGAAAAACACAACTTGCCAAAAG
CTGGGGGTCATAATGGAGCAGATCAAAATGCTTCAGGCCCAAGCGATGGA
GATACTTAAGGAGTCCACTCTCAACCGAGATCTGCACAGTGCGGCCTGCA
ATTTCACCAAAAAACCCGGACACATCTATCATCTTTATCAAAGGCCATCG
GGTCAAAACTATTTCAGCATGCTATCACCGGAAGAATGGAGTCTCTCCGT
TGACCAAACATTCAAAGGCAGCTACAGGTTGGAGTACGATTTGAGCTGGA
CCCCACTGGACAAGATTAAGGAGCAGGATGAGAAGCTAAAGTGGGCGGAG
CAGTGCATGCTAAAGGCACTAGATGGTGGGCGTGGTTCGGCCATGGCAAT
TGACTTTAATATAAGCAATGATGCAAGCTTTCTAGACCAT
FMO08019.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31800-RA | 751 | CG31800-RA | 103..666 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19033742..19033930 | 572..384 | 945 | 100 | Minus |
| 2L | 23513712 | 2L | 19033988..19034152 | 384..220 | 825 | 100 | Minus |
| 2L | 23513712 | 2L | 19034205..19034363 | 221..63 | 795 | 100 | Minus |
| 2L | 23513712 | 2L | 19034420..19034474 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:03:02 has no hits.
FMO08019.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:47 Download gff for
FMO08019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 1..546 | 27..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:07 Download gff for
FMO08019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 97..666 | 1..572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:48:16 Download gff for
FMO08019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 97..666 | 1..572 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:48:16 Download gff for
FMO08019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19034420..19034480 | 1..63 | 93 | | Minus |
| 2L | 19033742..19033930 | 384..572 | 100 | <- | Minus |
| 2L | 19033989..19034150 | 222..383 | 100 | <- | Minus |
| 2L | 19034205..19034362 | 64..221 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:07 Download gff for
FMO08019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19034420..19034480 | 1..63 | 93 | | Minus |
| arm_2L | 19033742..19033930 | 384..572 | 100 | <- | Minus |
| arm_2L | 19033989..19034150 | 222..383 | 100 | <- | Minus |
| arm_2L | 19034205..19034362 | 64..221 | 100 | <- | Minus |
