FMO08023.5prime Sequence
667 bp (329 high quality bases) assembled on 2009-09-01
> FMO08023.5prime
CAGTCGACATGAGCAGCACTGGTGTTGCAAGTAGCAGCACAACAGCCGAA
GAGGATTGGCCCACGGCCGTTGAGTTTGTGATTATGACAACGCCCGCAAG
CGAATTGGAAGCCAGCACGGAAACCATTGGTAACAATGGCACCACCGAAA
CGACCGTTGGCGAGGCACCCATCATCGGATCGTCGGAAGGATCCACACGA
TCGATGGAGCCAACCACCGCGAGTCCGCTGATGAGCACAAACCCATCGAG
CAGCAGCAGTCTGGTTAGCACCATTCCCTTGCCACCGACAGCGGGACTGC
CTGTGCAGGATAATCAGCCATTGCCGTGCACATGCGGCGTCTTCCTCTCC
TCGCAAATCCCAAATGGCTTGCCGACAAAGCCACTTATCCACCAGGAATT
GGATCATATGTTTCCCTGCAATGCCATCGGTCGCAAGCAGTGTCAAACCA
AATGCCTAGAGACGATCGTACAACATCTGCCGAATTCCGCAAATATAGTT
GCTCCGCACTGGGTCACGATTTGTCACAAGGAACGGGCCTACTTGTTCAC
CAAGAACTGTCACAATCAATGGGTTAATACCAATCTGCAGGCGGGCAGGT
AGTACTGTTGTCGCTCTGGCGTTTCCCTACCGTTGCCCATTGATGGGTGC
AAGCTTTCTAGACCATT
FMO08023.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fcp3C-RA | 963 | CG4015-RA | 287..926 | 8..648 | 3075 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3173668..3174124 | 464..8 | 2270 | 99.8 | Minus |
| X | 23542271 | X | 3173413..3173596 | 648..464 | 735 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:56:31 has no hits.
FMO08023.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:50 Download gff for
FMO08023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 1312..1962 | 1..654 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:13 Download gff for
FMO08023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 281..931 | 1..654 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:35 Download gff for
FMO08023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 281..931 | 1..654 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:35 Download gff for
FMO08023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3173408..3173595 | 465..654 | 95 | <- | Minus |
| X | 3173668..3174130 | 1..464 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:13 Download gff for
FMO08023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3067441..3067628 | 465..654 | 95 | <- | Minus |
| arm_X | 3067701..3068163 | 1..464 | 99 | | Minus |
