FMO08029.5prime Sequence
341 bp (341 high quality bases) assembled on 2009-09-01
> FMO08029.5prime
CAGTCGACATGGGAGCATTGGCAGAGCTGGCTGGTGATGAGAAAAACGGC
GAAGGATCTCGTACTTTTGTGTTCACCAACGAGGGCCACACGCTGGGAAA
TGCGCTGAAAACGATCATAGCCCGCTACCCGGAGGTGGATTTCTGTGGCT
ACACGATTCCGCATCCCACGGAGCAGAAGCTGCACTTCCGCATTCAATCC
CGTCGAGACAGAGCCATAGATATACTTAAACGGGGACTGGAGGATCTGGA
GGGTCTGTGTGATCATACAATCGTTACGTTCGAAAAGGAGATGGCCGAGT
TTAATGCAATGAAAGTGGAAAATGCAAGCTTTCTAGACCAT
FMO08029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Cg-RA | 404 | CG10685-RA | 58..372 | 9..323 | 1575 | 100 | Plus |
| l(2)37Cg-RD | 681 | CG10685-RD | 352..649 | 26..323 | 1490 | 100 | Plus |
| l(2)37Cg-RC | 633 | CG10685-RC | 305..601 | 27..323 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19133055..19133353 | 323..25 | 1495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:41:54 has no hits.
FMO08029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:41 Download gff for
FMO08029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 1..318 | 9..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:32 Download gff for
FMO08029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 58..372 | 9..323 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:03 Download gff for
FMO08029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Cg-RA | 58..372 | 9..323 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:03 Download gff for
FMO08029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19133055..19133351 | 27..323 | 100 | <- | Minus |
| 2L | 19133409..19133426 | 9..26 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:32 Download gff for
FMO08029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19133055..19133351 | 27..323 | 100 | <- | Minus |
| arm_2L | 19133409..19133426 | 9..26 | 100 | | Minus |
