FMO08036.5prime Sequence
688 bp (688 high quality bases) assembled on 2009-09-01
> FMO08036.5prime
CAGTCGACATGGAGTTACGCAGCCGAACAAACAGGAGATTAGTTGACTTC
CTCAAAAGCGCAGGCGTTTACGAGGAAGGCATGGATATTGAGGAAATGAC
CGAATTAGCAAGTGTCGTGCAGCAATCAGCTAGTATCAGTCCCCAGGATG
AGGATCTAGAAAGGGCTCTGCACGAGAGCGAGTCTGATTTTTTGACTTCG
CATCCCAGTGCTTTGCACAACTCCACGATGATCATGTCGCCGCAAGTGTC
CAGAAGAAATCCCTCAGACATGGACAGTCCACCGAGCGAGCCGATCCGTA
TAACTTTTCGGGCTTTGGTGCACCGTGCCATGGACTGGAGTCCCACCACG
GGCAATCAAATTCCCGATCGCAAGCGCATTGCTGCGGATCGCAATCAAAA
CGTCGAACTAGTTGGCAAACGTTCCAGAGCAACGCCGGCTATCAGCATTG
GCCAGGCACCGGAGGATGAGCCGCACAATGCCGACGCCACACCCGTTTCC
CCGGGCAACGAATGCGACTCCGGCGTCAGCTGGGAGAAGATATCTTTGTC
CAGCGCCAGCGATAGCACCACTCTTCCTTCCATCGGGCGAAATGCCCGAT
CGACATTTAATCAGCACAGCAGCGTCGCCGTCTCGGATTTCTCAGATGCC
AATGAAAATCAGCCAGGAAGCAAGCTTTCTAGACCATT
FMO08036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14931-RB | 912 | CG14931-RB | 106..765 | 9..669 | 3220 | 99.4 | Plus |
| CG14931-RC | 1024 | CG14931-RC | 209..877 | 9..669 | 3120 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11788834..11789328 | 174..669 | 2320 | 99.2 | Plus |
| 2L | 23513712 | 2L | 11788653..11788769 | 58..174 | 585 | 100 | Plus |
| 2L | 23513712 | 2L | 11788542..11788591 | 9..58 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:00 has no hits.
FMO08036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:44 Download gff for
FMO08036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 74..747 | 1..676 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:30 Download gff for
FMO08036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 98..771 | 1..676 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:12 Download gff for
FMO08036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 98..771 | 1..676 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:12 Download gff for
FMO08036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11788534..11788590 | 1..57 | 92 | -> | Plus |
| 2L | 11788653..11788768 | 58..173 | 100 | -> | Plus |
| 2L | 11788834..11789334 | 174..676 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:30 Download gff for
FMO08036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11788534..11788590 | 1..57 | 92 | -> | Plus |
| arm_2L | 11788653..11788768 | 58..173 | 100 | -> | Plus |
| arm_2L | 11788834..11789334 | 174..676 | 98 | | Plus |
