FMO08041.5prime Sequence
626 bp (626 high quality bases) assembled on 2009-09-01
> FMO08041.5prime
CAGTCGACATGGATTCGCTGCTCCAGAAGATCTCAGAGCTGTTTCATAAC
TTTACTTCCCCCATTGCAGCGGTGGTATACAGTCCTAAGAATGTAGAGAA
TGCACAAGAAACCCAAACCACTGCAAACCAAATACCAGAAGCTTCGAGCC
AGGAAACTGGGAAGCCGGACTCTGATCGAACTGCACCTGATACCACTGAA
CCCCTAACCTCTGGTGATATTCCAACCCCAGATGTCAAGTTGCAAAAGTT
TAGGGAACAAACGGCTCCAGCTTTAAACTACGAGCTAGAGTTTGTTGACT
TCGTAGATCGCAACGCACCTCAGGGTCTATCGAAGAAGATAATTGATATA
TTGCCCTATCTGGAGGTCAGCTTTTTGTCCTGGCCAGCGTTTTGGATTTG
GCGCGGCTACAACTGGCAGTCCGCACGAAAAACGGAGAGAATCGCATTTT
ACATTCAAAGGACCTATCAACAGGCCAAGCTAATGCAGTTGGCTATCTTA
GCCACTGGTCTGTTCACGATATCAATGGGTCGACCTGCCGGCATACCAAT
AGAAATGCATACAGTGCACAATAATCAGGAAGAAACAGCTGACATCGGAG
ACTCCTCTGCAAGCTTTCTAGACCAT
FMO08041.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32299-RB | 1205 | CG32299-RB | 54..654 | 8..608 | 3005 | 100 | Plus |
| CG32298-RB | 1205 | CG32298-RB | 54..654 | 8..608 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2390483..2390936 | 461..8 | 2270 | 100 | Minus |
| 3L | 28110227 | 3L | 2390277..2390424 | 608..461 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:56:06 has no hits.
FMO08041.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:33 Download gff for
FMO08041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32299-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:05 Download gff for
FMO08041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:21 Download gff for
FMO08041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:21 Download gff for
FMO08041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2390272..2390423 | 462..616 | 97 | <- | Minus |
| 3L | 2390483..2390939 | 1..461 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:05 Download gff for
FMO08041.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2390272..2390423 | 462..616 | 97 | <- | Minus |
| arm_3L | 2390483..2390939 | 1..461 | 99 | | Minus |
