FMO08045.5prime Sequence
995 bp (917 high quality bases) assembled on 2009-09-01
> FMO08045.5prime
CAGTCGACATGAATTTATCCATCCGCGCTATTTCGGCCATCTGCGGCGTT
TTCTTGGGCTGCTGCAGTGGCGTCGTCTTCTTGGAGCTCCTGGTTAAACT
GGATCCCGGCGCTGGAAACCTTATAACTGGCGCCCAGTTTGCATTTATTG
CCCTCGAGGGCTTCATCTTCACCTCGAAGTTTGGCCTGGCCCAGAGAGTG
ATCAGCCTGCGCGACTATGCGCTCCTCGTGGCCATGTTTTTCCTGACCAG
CGTATGCAACAACTACGTGTTCAAGTTCAAAGTTCCAATGACACTGCACA
TGATCATACGCGGCGGTTCGCTGATCTCCAACATGTGCCTGTGCACGTTG
ATCCTGAAGAGGAGTTACCGGTTGAGTCAGTACATATCGGTGCTCATGAT
CAGCGTGGGCATTTTCGTCTGCACATATTTCTCCAGTCCGGATTTGGTGG
GTAAGATGGAGAATTTGGATAGTGGCGCCGAGGCGGATACGTTCTGGTGG
CTGTTGGGCGTGGCACTCTTGGTGCTGGCTCTATTTGTTTCCTCCTACAT
GGGAATTACACAGGAGTTGCTGTATCGACGTCATGGCAAGTGCGCCAGGG
AAGCGTTGTATTACACCCACCTGTTGCCGCTGCCCGCCTTCCTGCTCATG
CATGACGACATACGGACGCACTGGCTTTTGGCGTTCACGGGCGAGTCCTA
CCAGTTGCCCCTCCTGGGCGTGGCAGTGCCCTAATCCTGCTATACTTATT
GGGCAACGTGCTTGCGCAGCATTTGTGCATCACTTCCGTTTACACCCTGA
CCACGGAGTGCAGCTCGGCTGACTGTGACTCTGATCCTCAACACTCCGCA
AGTTCATCTCGCTGGTCTTTTCGATCGTATTACTTCCCAAATCCCCTCCA
CTGGGTGGACACTGGCTGGCCACGCGCTTGTCTTTGTGGGTCACCTTGAT
GTTTGCAATGTGATCAGAGTTCCGAATGCAAGCTCTTAAGACCTT
FMO08045.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14511-RA | 1216 | CG14511-RA | 92..1057 | 8..976 | 4500 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29145837..29146802 | 976..8 | 4280 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:53 has no hits.
FMO08045.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:29 Download gff for
FMO08045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 1..969 | 9..980 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:25 Download gff for
FMO08045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 86..1062 | 1..981 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:09 Download gff for
FMO08045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14511-RA | 86..1062 | 1..981 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:09 Download gff for
FMO08045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29145831..29146806 | 1..981 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:25 Download gff for
FMO08045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24971553..24972528 | 1..981 | 97 | | Minus |
