Clone FMO08046 Report

Search the DGRC for FMO08046

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:80
Well:46
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18518-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO08046.5prime Sequence

512 bp (512 high quality bases) assembled on 2009-09-01

> FMO08046.5prime
CAGTCGACATGAGTTCCAAAAAGAATATAACTCCACCAAACAATTCAGCC
GATAAGGAAACGGATCGCAAAATCCCCGAAGAGTCTCTATCAATCACTAA
CCATCCGGGGGCCACATCAACGCCAACTTATATGACACGCAAACGGCAGA
GGCTTTTATCTCTCCAGATGGATTCTGCATTGTCATTGTCATTGGTGGAT
CGAGTTCCACAAACATTCGAGGATATTCGTGGACGAAAGGGTATTCGTGA
TGCCAGTTCTCCAAAAACTGGTAAACTCCCAAGGACTAAAGCCCGGAATA
TACCGAAAACACCAGCGCGTGTTTCCCCAAGTATAAATCATGGTAGGAAT
TCTGCTAAGCCAAAGACCCCAGCTAAAAAGAAGACTACGGAGAAAACTCC
TGCGAAGACGCCCACAGACACGCCGAAAATATCGCCAAAAAATACGCGAC
AAATATCGCCGAACAAGTCGCCAAAAACTTTCTCGATGATGCAAAATGTT
CCAGCAAAAAAA

FMO08046.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG18518-RA 1090 CG18518-RA 51..554 9..512 2520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15835105..15835608 512..9 2520 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:36:35 has no hits.

FMO08046.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:38 Download gff for FMO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18518-RA 1..497 9..505 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:06 Download gff for FMO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18518-RA 51..547 9..505 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:55 Download gff for FMO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18518-RA 51..547 9..505 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:55 Download gff for FMO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15835112..15835608 9..505 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:06 Download gff for FMO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15835112..15835608 9..505 100   Minus