FMO08048.5prime Sequence
884 bp (884 high quality bases) assembled on 2009-09-01
> FMO08048.5prime
CAGTCGACATGCTAAAGAGACCTGCGTTAGTTTATCGGTGCCTTCAGACT
TCTGTTAAAAGGTCCTACCATCTAAATGCACATGAACATTTAAGAAAAAA
AGAAATTCTCAAGCCCGAAAGCCAGCCTAGTCAAAAGCATAAGAAATTTG
GAGACGGCTCCATTGGAGTGATTCATGTGATCAAGAACGAATATTATGGG
CTCCCCAATCCCATGCACCGAAAATTCCGGGAAGATCTGGAGAAACACCA
AGACCGGAGGAAGGAATCAAACCTTTCGTTAAAGGAAGAAAAGCGTGAAG
ATCTTGAAAAGATGCTAAAGGAATGCCAGAAGCTTGTCAAAGAAATCACC
ATGCAGGCTAATGATGGCGATGTTACGAAGATCTGCAAGGAACTAGCCCA
AAAAGAAAAGATGGACAAGGAAAAAATAAAGAAAAAGTGCCGAGAGCTGG
CAGCAAGAGAAAAATGTGAAAAGGATAAGCTGAAAAAGAAGTGCAAGAAG
TTGCTCAAGAAGGATAAGTGCAAGAAAAAAGATACTTGCGAAGAAGAGAA
GCCTTGTGAAGAAGAAGATCCTTGCGAGAAAAAAAGCTGTTGCCCCAAAG
ATCCTTGCGCTAAAAAACCCAAGAAAGTTGACCCCTGCAAAAAGAAAGAT
CCCTTGCAAAAAAGAGGATCCATGCAAAAAGAAAGGCTGTAAATTGAAGA
AAAAGTGCAAGGAGGTTGCGGAGAGGGAGCAATGCAAAAAGCTGGCCGAG
AAGAAGAAGTTTAAGAAAATGATAAAAATATGCAAAAACCTTGCGGCGAA
AGAATAATGCCAAAAAATGGCCCGAAAAGAGATGTGCAGGAAAAAGGCCA
AAAAGGGAAAAAGAATGCAAGCTTTCTTGACCAT
FMO08048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| djl-RA | 1098 | CG1984-RA | 125..981 | 9..865 | 4120 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7061038..7061798 | 101..862 | 3575 | 98.8 | Plus |
| 3R | 32079331 | 3R | 7060891..7060984 | 9..102 | 470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:02:40 has no hits.
FMO08048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:37 Download gff for
FMO08048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..870 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:33 Download gff for
FMO08048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..870 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:45 Download gff for
FMO08048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| djl-RA | 125..985 | 9..870 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:45 Download gff for
FMO08048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7060891..7060984 | 9..102 | 100 | -> | Plus |
| 3R | 7061040..7061806 | 103..870 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:33 Download gff for
FMO08048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2886613..2886706 | 9..102 | 100 | -> | Plus |
| arm_3R | 2886762..2887528 | 103..870 | 98 | | Plus |
