FMO08049.5prime Sequence
1119 bp (991 high quality bases) assembled on 2009-09-01
> FMO08049.5prime
CAGTCGACATGGACACAACAATGCCGATGGGCATGGTGCCCAACAGTCTC
AATCCGATCCTCAATCCTCGACCCCTGCCGATACCCGTTACCAAGCCCAG
AACCAAACTCCAGCCGGATGAGCCACACGATGGCGTTTTAGCGTTTAACA
AGGGAAAAGTACCTCCGCCGGTATCCTCACGTCCTATTCCGCTCCAGCGT
GCAATGTCTGAGGTTCGGGACGCGCTGCGAGCTCAGCCTCAGGCCAGTGA
CATTCGCCTGTTGATCTTCACGGCGGCGGCCAGCAGTGTGGAGCACGAGA
GAACTCTCATTCCGGTGCCGCCACAATTTCAAGCGGCACCAGGCTCCGGC
TGCCAAGTGGATCGATTGCGTCACGCCGTCGCCGATAATTGGCCCTCCTG
TCGCATCATGTTGGACTGCCCCAGTACTGACGAGCAGTATGCCGCTTTGA
TGCCGGACGATGTGGACGCCCTGCATTTGCTGCACTGGATCCTGGTGGCC
ACGCCCTCGTCGCCCACTCTGCGCCGCATGTCGGGATTGCATTTGCGGCG
ACTTTGCCGCTTTCTGGGCCTGGCACGACCCACCTTGGAGCCCGGCCATC
TGCTGAGCATCAGTTATGAGCGGAATGTTCAGCGGCTGGGCGATTCGAGT
CCAAGGCCAAGATCCAGTTACGCCTATCTGGGCTTGCCCTTTCAGTACCT
ATATCGTTTCCTGGCCACTGGACGTCTGGAGCAACCGCCAGGTGTTGCCA
TTCGTTTGTATGCCCAACCGGAAACAGCCTTGGTTCACTGCGACGAGCTG
AGCTCGCTGCCGCAGCAGCAGCATGTCCAGTCGGAGGAGCAATCGTCCAG
CCAATCCATTGCAGAGAGGGAGCAGTCCTGGAAATTCAAGCTCGCTGTGC
TGGCGGACTCCACGCTCACTGCACCGGCAAAGGGCACTGGTCATATGCGA
CCTACCCTCGGAGTTGGACGATCCATTGCCATTCGCCGGAAAGCATTTTC
CTCGAGTACTTGTGCAGGATCGCCTGTCACCTGGCGACCTGCTATTCTGC
TCTTCTTCGACGAGGCCGGTGGCCTCCACATTATGTCGGTCTGCGGCCAA
TGTATTGGCTGGACATCGG
FMO08049.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15337-RA | 1430 | CG15337-RA | 57..1168 | 6..1113 | 5020 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8160322..8161250 | 149..1078 | 3980 | 97.3 | Plus |
| X | 23542271 | X | 8160110..8160252 | 6..148 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:02:30 has no hits.
FMO08049.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:27 Download gff for
FMO08049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15337-RA | 1..983 | 9..990 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:27 Download gff for
FMO08049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15337-RA | 51..1042 | 1..990 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:40 Download gff for
FMO08049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15337-RA | 51..1042 | 1..990 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:40 Download gff for
FMO08049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8160104..8160252 | 1..148 | 97 | -> | Plus |
| X | 8160322..8161164 | 149..990 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:27 Download gff for
FMO08049.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8054137..8054285 | 1..148 | 97 | -> | Plus |
| arm_X | 8054355..8055197 | 149..990 | 99 | == | Plus |
