FMO08050.5prime Sequence
1124 bp (992 high quality bases) assembled on 2009-09-01
> FMO08050.5prime
CAGTCGACATGAAGAAGAAGAGTCGTAGAGATCGGACACCAAAAGTAGAA
CAACCTGAACCATCGAGAGTTGTCAACACGGAGCCTATTCGACTGAACGT
GGAACCCCAATCCCAAGAGATAGATGACCAGGCTGCACCATTTATTTTGG
TAGACTGTGCGAAATATGAGGATCGTTCAGATTTGGAAGCAATGCTTAGT
TCCATAGAAAAGGAACGGATGAAAAAGGTTCAGGCAGATATAGAGCAGCA
ATATTTTCCCCTCCTGGAGGATGAAGAACCACCTCCAGAATTAGATATGC
CTATAAACCTAAGCTCTCAAGCATTGGCTGTACTGAATGATGCAGATAAT
GAGCGCCGCTTTAAAGAGGATCTGGAGAGCCTTAGTATTGCTGGACTGGA
AGAGAAAGATACATCCATTAGCATTACCAACATGAAAATAGAAGACAGCA
AACTATTGTTTCGGACTATGCCAGGTATGAATCAGATTTGCTGCACGCTA
GAGCAGATGAAAAATGTTCATGGGAAAATTGGACCAGCAGAACCAACTCC
ACAGGCACGTTGCACCAGCTTGATTCCACTTTCAGGCCTTCGCCGGCAAG
ACACCTTCGAAATTAAACGTAAAAAGAACCAAAAGATTAGATATCCCGAG
GTTTCCACCAAATCAGCAATTAGCGAAAGGAAACATCTACCATTAATTGC
CAAGGGAGGAAAATGTGAGAAAGTTATCTCAGAGACTGATAAGATTTTCA
GCCAGATTGGCGATCTTCTCGTGAAACTGCAGCTCCAACACGAGGGCAGC
AAAGTCCTGAACAAGGGATCCTCTTATTCCTACATGGTGAACATTAAGCC
AGCTGGAGTGCATCCAATTGTTCAGTTTATGCGCTTACAAACTCAAATCG
CACGAAGTAGAGGAGACGCATGCCGAAATCTAGACTTCTCACGCTCATTG
ATCAACATTTTATACCCTGTCGTGTGACTATGGAGACTTCTGAGTGTCCA
CGACGCACGATGTATCGATGAGCTCCATGGGTCGATTGTCCTCGCGACGC
CGTCCTCCAGAATCAAACATTCATTTTACGCAAAGTCAAGTCCATTAGCA
CCTTACGTCAATTTGGCAGCAGAA
FMO08050.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10164-RB | 2401 | CG10164-RB | 709..1811 | 1..1084 | 4935 | 97.6 | Plus |
| CG10164-RA | 1933 | CG10164-RA | 539..1641 | 1..1084 | 4935 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23554984..23556015 | 1020..1 | 4580 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:56:59 has no hits.
FMO08050.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:26 Download gff for
FMO08050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 541..1643 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:32 Download gff for
FMO08050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 539..1641 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:45 Download gff for
FMO08050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 539..1641 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:45 Download gff for
FMO08050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23554944..23556015 | 1..1054 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:32 Download gff for
FMO08050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19380666..19381737 | 1..1054 | 97 | | Minus |
