FMO08057.5prime Sequence
311 bp (311 high quality bases) assembled on 2009-09-01
> FMO08057.5prime
CAGTCGACATGGCTAAGACACCGGAAAACATAGCCATCGATCAGTTGGAC
AAGGATCAAATTAAGACGTTTTCCGACTTCCTAATGTCCTACAACAAACT
GTCCGAGACGTGCTTCACAGATTGCATACGCGACTTTACAACGCGGGATG
TTAAGGATTCCGAGGAGAAGTGCTCGCTGAACTGCATGGAAAAGTATCTG
AAGATGAACCAACGCGTCTCGCAGCGTTTCCAGGAGTTCCAGGTTATTGC
CCACGAGAACGCACTGGCCATGGCTCAAAAGACTGGCAAACTTGCAAGCT
TTCTAGACCAT
FMO08057.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tim9a-RB | 461 | CG1660-RB | 73..357 | 9..293 | 1425 | 100 | Plus |
| Tim9a-RA | 516 | CG1660-RA | 128..412 | 9..293 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13385659..13385789 | 163..293 | 655 | 100 | Plus |
| X | 23542271 | X | 13385499..13385596 | 68..165 | 490 | 100 | Plus |
| X | 23542271 | X | 13385337..13385396 | 9..68 | 300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:54:47 has no hits.
FMO08057.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:18:20 Download gff for
FMO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim9a-RA | 79..372 | 1..293 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:02 Download gff for
FMO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim9a-RA | 119..412 | 1..293 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:12 Download gff for
FMO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim9a-RA | 119..412 | 1..293 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:12 Download gff for
FMO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13385328..13385396 | 1..68 | 94 | -> | Plus |
| X | 13385500..13385595 | 69..164 | 100 | -> | Plus |
| X | 13385661..13385789 | 165..293 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:02 Download gff for
FMO08057.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13279361..13279429 | 1..68 | 94 | -> | Plus |
| arm_X | 13279533..13279628 | 69..164 | 100 | -> | Plus |
| arm_X | 13279694..13279822 | 165..293 | 100 | | Plus |
